| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5772 |
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| Symbol | |
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| ID | 5320074 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | + |
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| Start bp | 740417 |
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| End bp | 742534 |
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| Gene Length | 2118 bp |
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| Protein Length | 705 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640777479 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_001314411 |
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| Protein GI | 150377816 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.429261 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.122613 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGCATAG TCTTCACGCA TGGATATAGG GGGCTCGTTC ACGCCTCGAT CCTGCTGTTT
GTCCAGTTCG TTTTCGGGCT AGCCGCTCCC TTGGCGGCTC AGGAGGTGGC GACACAAGCG
CCGCCGGCCA AGGTCCAGCA ACTCATCGAG TTGTTGGACG ACCCGGACGT TCGGCAATGG
CTTGCGGCCA AACAGACGAC TGCGACGGCA GCCGTGATCC CCCCGGCGGG ATATGCATCT
CGTTTGGTCA CAGGAATTCG GCGACATCTC ATCGGCATGG GCCAGGCCAT ACCACGACTG
GTCCCCGAAT GGATCGCAGC GAGAGAGCGC ATAGCACATG AACTTCAGAA CGGAGCGACG
ACGGCGATCG TGTGGGGCCT CTCATTGGTG CTCATCGCAG GAAACGCCGC CGAGTTTCTC
GTGCGTTATG CTCTGAGGCG GAGTGCGCGC CGAAGCGCAG CCGAGCCTGG GCCGGGACTG
GCCGCTCTTA TCCGCATTGC GCCGCTCGTC GTCTTCGCGA TCGCAGCGGT CGCCGCTTTT
GCGCACACCG GTTGGCCGAG CCGCCTGGAG GCGGCGGTTG CGCCGCTGCT CGTCGCATGG
ATCGGCGCTC GTTTGCTAAG CGCCGTCGCT TCGGCGGTGA CGGAACCGCG ATACACGGGC
AGTGGCGCGG CAGAGGGCCG GGCGGGCGCG CCAGGGCCGG AAGTGATGCT ATTCTGGTAC
AAACGTTCCG TGCCCTTCAT TTATGCTATG GCTTTCACCT GGGCCGTCGT CGATATGATG
CAGGCTCTAG CTCTCCCCGC CGATGTCCGA GATCTGACGG CCGCCGTGCT TGGCCTTGTC
GTGCTTGGCA TGGCGATCGA CGCGGTGGTG CGCCGGCCAT TGGTTGAAAT GACAGCCGGA
CGGCGTGTAT TACGCGATGC GCTCATCATC GGTTTGCTCG CGCTGTTGTG GCTCCTTTGG
GCCGCTGGGA TGAAGGTGCT CTTCTGGGTC GGCGTCTTCG CACTCATTCT GCCGCCGCTA
TTGCGTTTCA CGACTGTCGC GACCCGGTCG ATGCTGGACA CCGAAGCGGC CGACTACATT
CCTATAATGC GCAACGTCTT GATTGACCGC GGTATACGGC TCTTGATAGT TGCGCTGGCG
GCCGCCTGGC TCGCCATGGT TTTCAAGCTC CACGGCAGCC CGGTGATTCA AGGTGATGTC
GCCAAGCACA TTTTTCGCGG CGTTCTCGCC GGGGTGATCA TCCTGCTGGT GGCAGATTTC
GTCTGGCAAT TGATGAAGGA GTTCATCAAT CTTCAACTGA AACGGGCCAC AATGGAAAGT
GGGGACTCTG CACAAATCGC CCGCAACATG CGGGTGCGCA CACTGCTGCC GATCCTGCGC
AATTTTCTCG CAGTCTTTAT CGCGATCGTC GCCGGCATGA TGATTCTCTC CAGCCTCGGA
GTCCATATCG GCCCGCTGAT CGCGGGCGCA GGCGTTTTCG GCGTGGCAAT TGGGTTCGGC
TCACAGAGCT TGGTCAAGGA CATCATAAGC GGCATCTTCT ACATGATGGA CGATGCTTTC
CGCGTCGGCG AATACATCCA GAGCGGCAGC TATATGGGGA CGGTCGAATC CTTCAGCATT
CGCTCTGTCA GGCTGCGTCA TCACCGCGGA CCGGTGTTCA CCGTACCCTT CGGTTCGCTC
GGCGCGGTGC AGAACATGAG TCGCGACTGG GTGATCGACA AGTTCACTAT CAACGTCGCC
TACGACTCCG ATGTCGCCAA AGTGAAGAAG GTAGTGAAGG GCGTAGGGGC CGCATTGCTA
GAAGACCCCG AACTCGGGCC GCTGATCATC GAAACGGTGA AGATGAAGGG CGTCGAGCAG
TTCGGTGACT ATGGCATTAC GCTGGGCTTC GCCATGACCA CTAAGCCTGG TCATCAGACC
CAGGTTCGGC GCCGTGCGCA GGCCCTGATT AAAGATGCGT TCAAGACACA TGGCATTCAC
TTCGCTTCGC CGACAGTCCA GGTCGCCGGC GACGAGGCGC AATCGTCAAT GGCGGCTGCA
GCCATGACGC GCGATACCAT CGCCAAGAAG AACGCTGCCT TGGCTGCCCA ACAGGGAGGT
GAGGCGGCGG CCGAGTAG
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| Protein sequence | MCIVFTHGYR GLVHASILLF VQFVFGLAAP LAAQEVATQA PPAKVQQLIE LLDDPDVRQW
LAAKQTTATA AVIPPAGYAS RLVTGIRRHL IGMGQAIPRL VPEWIAARER IAHELQNGAT
TAIVWGLSLV LIAGNAAEFL VRYALRRSAR RSAAEPGPGL AALIRIAPLV VFAIAAVAAF
AHTGWPSRLE AAVAPLLVAW IGARLLSAVA SAVTEPRYTG SGAAEGRAGA PGPEVMLFWY
KRSVPFIYAM AFTWAVVDMM QALALPADVR DLTAAVLGLV VLGMAIDAVV RRPLVEMTAG
RRVLRDALII GLLALLWLLW AAGMKVLFWV GVFALILPPL LRFTTVATRS MLDTEAADYI
PIMRNVLIDR GIRLLIVALA AAWLAMVFKL HGSPVIQGDV AKHIFRGVLA GVIILLVADF
VWQLMKEFIN LQLKRATMES GDSAQIARNM RVRTLLPILR NFLAVFIAIV AGMMILSSLG
VHIGPLIAGA GVFGVAIGFG SQSLVKDIIS GIFYMMDDAF RVGEYIQSGS YMGTVESFSI
RSVRLRHHRG PVFTVPFGSL GAVQNMSRDW VIDKFTINVA YDSDVAKVKK VVKGVGAALL
EDPELGPLII ETVKMKGVEQ FGDYGITLGF AMTTKPGHQT QVRRRAQALI KDAFKTHGIH
FASPTVQVAG DEAQSSMAAA AMTRDTIAKK NAALAAQQGG EAAAE
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