Gene Smed_5771 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_5771 
Symbol 
ID5320073 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp739839 
End bp740369 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content59% 
IMG OID640777478 
Producthypothetical protein 
Protein accessionYP_001314410 
Protein GI150377815 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.148222 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.178418 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCGACTG CACACATGGA GGCTGATTTC AGCGGCATCG GCAACTTCAT CTACACGAAG 
CTGTCCGCGC ATGGTGAGAC CCCCTTCGGT GTGCTGGCAA CGGACATCGA CGTGAAGTCC
GAGAGCTTTT CGGGCTTGTT CGGCATGGCA TATGCGGTTC TGGACAGCCC GCAAGGACAC
CTGGACCTGG TTGGCGGGTC AAGGTGTGGT CGGTCGAAAC CACGCTTTCG TTCAGCGGCG
GTCTCCAGGG CGGGATCGAG AGAGGACAGC GCCATTTGGG TGGGCGGAAT AGTCGGCTTG
CACGGGAGAT ATCCCTTAAC GCCTGAGATC TACCTGACAG GAGGGGAGAT CTGGTCGGCG
GCGGCGGAGC CGACATCGAC TGGGATGTCG CACTTGCATC GGTTACGAGT TCAACGAGCG
AATATCGGCG ATCGCTTTCT ATCATGCGCT CGGGATCGAC TACAGCGACG ACGTTTTCAT
TCTCGATGCC GCCCAGCAAG GACCCATTCT CGGGGTCGCT ATAAAGTTTG A
 
Protein sequence
MPTAHMEADF SGIGNFIYTK LSAHGETPFG VLATDIDVKS ESFSGLFGMA YAVLDSPQGH 
LDLVGGSRCG RSKPRFRSAA VSRAGSREDS AIWVGGIVGL HGRYPLTPEI YLTGGEIWSA
AAEPTSTGMS HLHRLRVQRA NIGDRFLSCA RDRLQRRRFH SRCRPARTHS RGRYKV