Gene Smed_5769 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_5769 
Symbol 
ID5320071 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp735697 
End bp736710 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content58% 
IMG OID640777476 
ProductNapD-like protein 
Protein accessionYP_001314408 
Protein GI150377813 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0560] Phosphoserine phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGCCA TTCGTAATTC CCTTAAATTG GCCCGTGACG CGGCGCTGGC AGTTGCAGCG 
GGCCTTATCT TTGCCGTTTC AGCGCTTGCC CAAACCGACC CGCTGCCTTC GTGGAATGAC
ACTGCCCCAA AAGCGGCTAT CGTCTCTTTC GTCGAAAAGG TCACCAAGGA GGGTTCGCCC
GACTTCGTTC CGGAATCCGA GCGCATCGCC GTCTTCGACA ACGACGGCAC GTTGTGGGTA
GAGCATCCGA TGTACGTTCA GCTCGCCTTC GCCCTCGACC GTGTGAAGGC GGAGGCCGCG
TCCCATCCGG AGTGGAAGGA CAAACAGCCG TTCAAAGCGG TACTCGAGGG CGACATGAAG
ACGCTCGCGG CAGGGGGCGA AAAGAGTCTC GTAGAGCTCA TCATGGAGAC CCATGCGGAT
ATGACCAGCG ACGAGTTCCA GAAGATCGTC TCCGAATGGA TCGCCACCGC ACGGGACCCG
AAATTCAAGA AACGCTATAC CGAACTTGTC TACCAGCCGA TGCTCGAACT GCTCGACTAT
CTGCGAGCCA ACGGTTTCAA GACCTTCATT GTATCGGGTG GCGGTATCGA ATTCATGCGG
CCATGGACGG AGCAGGTCTA CGGCGTTCCA CCCGAGCAGG TCGTCGGCTC GTCGATCAAG
ACGCAGTTCG AGATGCGCGA TGGCGAGCCG ACGCTCTTCC GTCTGCCGCA AGTCAACTTC
ATCGATGACA AAGCCGGCAA GCCGGTTGCT ATCAACGAGC AAATTGGCCG TCGCCCGATC
GCCGCCTTCG GCAATTCCGA CGGCGATTTG CAAATGCTGC AATGGACAAC GATGACGGGT
GGGAGCGTCC GTTTCGGCAT GCTCATTCAT CACACCGATG CTGAACGCGA ATACGCCTAC
GACCGCAAGA GCGAATTCGG CCGCCTCGAC AAGGCGCTTG ATGCGGCGGC GATAAACAAA
TGGGCGGTGG TCGACATGAA GGCGGATTGG AAAGAGATCT TTCCGAAGAA GTAA
 
Protein sequence
MFAIRNSLKL ARDAALAVAA GLIFAVSALA QTDPLPSWND TAPKAAIVSF VEKVTKEGSP 
DFVPESERIA VFDNDGTLWV EHPMYVQLAF ALDRVKAEAA SHPEWKDKQP FKAVLEGDMK
TLAAGGEKSL VELIMETHAD MTSDEFQKIV SEWIATARDP KFKKRYTELV YQPMLELLDY
LRANGFKTFI VSGGGIEFMR PWTEQVYGVP PEQVVGSSIK TQFEMRDGEP TLFRLPQVNF
IDDKAGKPVA INEQIGRRPI AAFGNSDGDL QMLQWTTMTG GSVRFGMLIH HTDAEREYAY
DRKSEFGRLD KALDAAAINK WAVVDMKADW KEIFPKK