| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5726 |
|---|
| Symbol | |
|---|
| ID | 5320028 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009621 |
|---|
| Strand | - |
|---|
| Start bp | 696881 |
|---|
| End bp | 697693 |
|---|
| Gene Length | 813 bp |
|---|
| Protein Length | 270 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640777446 |
|---|
| Product | beta-lactamase-like protein |
|---|
| Protein accession | YP_001314378 |
|---|
| Protein GI | 150377783 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGATTT TTCTTTGCTC CGCCTGCGGC ACCTCTTTCG ATGAAGGAGA GCACTTGCCA
AAAACATGCC GGATCTGCGC TGACGAACGA CAATATGTGC CAGCCTCGGG GCAGGCTTGG
ACCACGATGG AGGATCTTGC TCTGGATCAC CGCAACACGT GGCTCCAACT TGAGCCGGAC
CTAATCGCAA TCCAGACTGT TCCCGCCTTC GCCATCAACG AGCGTGCCCT GCTTCTGCGT
ACGCCGGCCG GGAACGTGCT CTGGGATTGC ATAGCTCTCC TTGACGAAGC AACGAACGCA
ATCATCCATG CGCTTGGGGG CTTGACCGCT ATCGCCATCT CACACCCTCA CTACTACACG
ACGATGCAGG ACTGGGCCGT CGCGTTCGAC GCACCGATCT ATCTTCACGC TGCGGACAAG
GATTGGATCT GCCGCCCTTC CGATCACATC CGCTTATGGG AAGAGGATGC TCTCGTCCTC
TCCTCCTCTG TCACGCTTGT TCATGGCGGC GGTCATTTCG GCGGCGGCAC AGTGCTTCAT
TGGACGGGTG AGGATGGGCA CGGTGTTCTG CTCGCCGGAG ATATCGTCCA GGTCACTCCC
GGAGCCGATC ATGTGTCGTT CATGTGGAGT TATCCAAACA TGCTGCCGCT AAGCGCCGCG
GAAGTAAGGA GTGTCGCCGA TCGGTTGGCG CCGTGGCGTT TTGAAAGGAT CTATGGGGCT
TTTTCCCACC AGAATGTTCG ACAAGGCGGT CATGATATGG TTGCGCGCTC CGCGCACCGT
TATATTGAAC GGATTCAGGG CCCCGGCCGG TAA
|
|---|
| Protein sequence | MTIFLCSACG TSFDEGEHLP KTCRICADER QYVPASGQAW TTMEDLALDH RNTWLQLEPD
LIAIQTVPAF AINERALLLR TPAGNVLWDC IALLDEATNA IIHALGGLTA IAISHPHYYT
TMQDWAVAFD APIYLHAADK DWICRPSDHI RLWEEDALVL SSSVTLVHGG GHFGGGTVLH
WTGEDGHGVL LAGDIVQVTP GADHVSFMWS YPNMLPLSAA EVRSVADRLA PWRFERIYGA
FSHQNVRQGG HDMVARSAHR YIERIQGPGR
|
|---|
| |