Gene Smed_5724 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_5724 
Symbol 
ID5320026 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp695652 
End bp696083 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content66% 
IMG OID640777445 
Productmethyltransferase type 11 
Protein accessionYP_001314377 
Protein GI150377782 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.262167 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAAGG ACCTGTCGAA GCGGCTTCTC GCCATCGTGG ATGCGCTGCC GCTGCGGCCG 
GGCATGCGCG TGCTGGAGAT CGGCTGCGGG CCTGGTGCAA TGGCCCGTGA GATCGCGGGG
CGGATTGGCG GCGGGCACGT TCTCGCCATT GACCGATCCG CCAAAGTGAT CGAGCAGGCA
CGATCCGCAT CGCAGGCGGA GATTGAATCC GGAAGGCTGA GCTTGCGCCA GGTTACCGCT
GAGGAATTCG AGCTGGGAGC GGGTGAGATG CCGTACGATA TCGCAGTCGC CGTGCGCGTC
GGTGCTCTGG ACGGACGCCA CCCCGAAGCG GGGCGACGGG CGAAACGCCG TGTTGCGGCG
GCGTTGACGC CGGAAGGACA ACTGTTCATC GACGGAGGCG ATCCACTGCG CACGCTCTTG
CTGGACGATT GA
 
Protein sequence
MAKDLSKRLL AIVDALPLRP GMRVLEIGCG PGAMAREIAG RIGGGHVLAI DRSAKVIEQA 
RSASQAEIES GRLSLRQVTA EEFELGAGEM PYDIAVAVRV GALDGRHPEA GRRAKRRVAA
ALTPEGQLFI DGGDPLRTLL LDD