Gene Smed_5715 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_5715 
Symbol 
ID5320017 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp687070 
End bp687336 
Gene Length267 bp 
Protein Length88 aa 
Translation table11 
GC content56% 
IMG OID640777437 
Producttransposase IS3/IS911 family protein 
Protein accessionYP_001314369 
Protein GI150377774 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAGC AGAGATTTAC GGAAGAGCAG ATTATTGCGG TACTGAAGGA GCAGGAGGCT 
GGCGCGAAGG TGGCGGACCT CTGCCGCAAG CATGGGATTT CGGACGCGAC ATTTTACAAT
TGGAAAGCCA AATTCGGGGG CATGGAGGTT TCCGAGGCGA AGCGCCTGAA GGCGCTCGAA
GAGGAGAACG CCAAGCTGAA GAAGCTGCTC GCCGAGCAGA TGCTGGATGC CGCCGCACTC
CGCGAGCTTC TTGCAAAAAA ATGGTAG
 
Protein sequence
MKKQRFTEEQ IIAVLKEQEA GAKVADLCRK HGISDATFYN WKAKFGGMEV SEAKRLKALE 
EENAKLKKLL AEQMLDAAAL RELLAKKW