| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5709 |
|---|
| Symbol | |
|---|
| ID | 5320011 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009621 |
|---|
| Strand | + |
|---|
| Start bp | 683053 |
|---|
| End bp | 683583 |
|---|
| Gene Length | 531 bp |
|---|
| Protein Length | 176 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640777433 |
|---|
| Product | MarR family transcriptional regulator |
|---|
| Protein accession | YP_001314365 |
|---|
| Protein GI | 150377770 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1846] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.054314 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGACG TAGTGACAGA GGATGACGGG CAGAGCGTCA CCGACCATGT GGATCGGCTT
CGCGGCCAAT GGGCGCGCGA GCTCCCCGAT CTCGACACCG AAGCGATGGC GATCTTCGGG
CGCGCCAAGC GGCTATCGAA CCTCATAGGC CCCAGCATCG AGGCGACCTT CGCAGCGTTC
GGCCTCGATC GTGGCGAGTT CGACGTGATA GCCACCTTGC GCCGCTCCGG ACCGCCCTAC
CGGTTGACCC CGACCGAGCT TTACACCTCG TTGATGCTCT CCTCCGGCGG CCTCACGCAT
CGGCTCGATC GCCTGGAGAA GGCAGGCCTG ATCAGGCGCG AGAAAGCGCC GCGCGACGGG
CGCAGCGTGC ACGTTGTACT AACCCAGGAG GGCGCTGCTC GCGCCGAACA GGCCTTTAGA
GCCGATATGG CGAATGAACG GAGATTTCTC GAACCGCTTG ACGCGCAGGA ACGGCAAATG
CTCGCGGGGC TGTTGCGCAA ACTGATCGCC GGAATCGAGG CAGGCTGTTG A
|
|---|
| Protein sequence | MTDVVTEDDG QSVTDHVDRL RGQWARELPD LDTEAMAIFG RAKRLSNLIG PSIEATFAAF
GLDRGEFDVI ATLRRSGPPY RLTPTELYTS LMLSSGGLTH RLDRLEKAGL IRREKAPRDG
RSVHVVLTQE GAARAEQAFR ADMANERRFL EPLDAQERQM LAGLLRKLIA GIEAGC
|
|---|
| |