| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5701 |
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| Symbol | |
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| ID | 5320003 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | + |
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| Start bp | 675073 |
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| End bp | 676059 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640777426 |
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| Product | TRAP dicarboxylate transporter- DctP subunit |
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| Protein accession | YP_001314358 |
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| Protein GI | 150377763 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.978231 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTTCA ACATGACTCG CCGCTATCTT GTCGGCGCGA CCATGCTCGC TGCAGCAGCA
TTCGCCGCAC CCGTCCTGGC GCAGGACAAG CCTGTTTTGA AGTTTTCGGC TGTTTTCTCG
GAGCAGGATA TCCGCGCCGA GATGACCAAG ATGCTGGCGG CGGATATCAA AAACGATTTC
ACGCTCGAGC CCTATTACGG TGGGAATCTC TTCAAGCAGG GTACAGAGCT CGTTGCGATC
CAGCGTGGCA ACCTCCAGAT GGGCAATATC GCACCTCAGG ATATCTCCAA GCAGATCCCA
GAGTGGTCGG TGCTGACATC TGCATATCTG TTCCGCGACG CGGCACATCT CAGCGCCTTC
TTCAACAGCG ATGTCGGCGC CGAGTTCAAG AAGATGGCTG AAGACCGGCT CGGCATCCAC
ATTCTTGGAC CAACCTATTT TGGCGCGCGA CAGATCGGTC TGAAGCCGGA AAAGAAGATC
ACGACGCCAC AGGACATGGC AGGCATCAAG CTGCGTATGC CCGGCGGCGA CGCATGGCAG
TTCCTCGGTG AAGCTCTCGG CGCCAATCCT GTGCCGGTGG CTTATGCTGA GGTCTACACA
GCACTCCAGA CCGGTGCGAT CGACGGTCAG GACAACCCGC TGCCGAACGT GAAGAACATG
AAGTTCTACG AAGTGATGTC GCAGATCATT ATGACGTCGC ACCTGATCGG CTATGACTTG
CTGGTGATCT CAAACGAGGT CTGGAATGAG ATGGCGCCGG AAGAGCAGCA GGCGTTTCAA
GCGGCGGCCG ACAAGGCAAT GAAGTTCAGC GAAGAGAAGC ATGTCGCACA GGAGAAAGCG
CTGGTTGAAG AGTTCAAGGC TGCGGGTCTG CAGATTTACG AGCCTGACAT CGAGGCTTTT
CGGAAGTTCG CTCAGGAGAA GTATGTGAAT TCCGAGCTCG CCAAGTCGTG GCCGGAAGGC
ATCCTGGAGA AGGTAGCTGG CCTTTAA
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| Protein sequence | MTFNMTRRYL VGATMLAAAA FAAPVLAQDK PVLKFSAVFS EQDIRAEMTK MLAADIKNDF
TLEPYYGGNL FKQGTELVAI QRGNLQMGNI APQDISKQIP EWSVLTSAYL FRDAAHLSAF
FNSDVGAEFK KMAEDRLGIH ILGPTYFGAR QIGLKPEKKI TTPQDMAGIK LRMPGGDAWQ
FLGEALGANP VPVAYAEVYT ALQTGAIDGQ DNPLPNVKNM KFYEVMSQII MTSHLIGYDL
LVISNEVWNE MAPEEQQAFQ AAADKAMKFS EEKHVAQEKA LVEEFKAAGL QIYEPDIEAF
RKFAQEKYVN SELAKSWPEG ILEKVAGL
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