Gene Smed_5683 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_5683 
Symbol 
ID5319985 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp647512 
End bp648426 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content61% 
IMG OID640777410 
Producthypothetical protein 
Protein accessionYP_001314342 
Protein GI150377747 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.167667 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGATT ACTCCGAAGG GCCTTCGACC AGAGATGAGG CCGTTCGCAC GGACATCACG 
CCAGTCGAGA ACGCACACAC CATTCTCGTC AACAAAGTGT CCTGGGGCGC TATCTTTGCG
GGTGTGGTGG TAGCTCTTGT CATTCAGGTC CTGCTGACAA TGCTGGGGGT CGGGATCGGC
GTAGCTACGC TTGATCCGCA GAGCGGCGAC AACCCGGCGG CAAGCACATT CTCGATCGTC
GCGGGCATCT GGTATCTGCT TTCCGGGATC GTTTCGGCAT TCACTGGCGG CTATATCGCC
GCCCGTATGT CGGGAAAGAC CGATGAAACG GCTGGAGCGC TACACGGTCT CACAACATGG
GCGTTCACCA CGTTACTCGT TCTCTACCTC TTGACAACCG CTGTCGGGAG CATCGTCGGG
GGAGCGTTCA GTGGGGTTGC CAGCGCGGTT GGAGGGCTCG GTCAGACTGT TGCGCAGACC
GCGGCGCCTA TGATCGCGGA GGCAAACCCG CTCGACGCCA TCGAACGGCA GGTTCGTTCG
ACTGGAACCG ATGCGGAAGC CCTCAACAAC GCCGCAATCA CGTCGATCCG GGCCTTGGTG
ACGGGTAACG AAAGCGAGGC AGAGGCTGCG CGGGAGAAAG CTGCACAGGC TCTAGCTAGC
GCGCGCAACA TTCCGGTCGA AGAAGCGCGA ACACAGGTTA CGCAGATGGA GGAGCAGTAT
ACCCAAGCGG TTGAGCGGAC GAAGCAGGAG GCGATCGACG CCGCCGATGC CGCTGCATCG
GCTGTCTCAG CCGGCGCATT GGTTGCTTTC CTCGCCCTCG TGTTGGGTGC AGTCGCAGGG
TGGTTTGGCG GTCATTCGGG CGTTGCCCAT CCGGTCATAG TGGATCGGTT GCTTCCAGGT
CGACGGCGGC TGTGA
 
Protein sequence
MSDYSEGPST RDEAVRTDIT PVENAHTILV NKVSWGAIFA GVVVALVIQV LLTMLGVGIG 
VATLDPQSGD NPAASTFSIV AGIWYLLSGI VSAFTGGYIA ARMSGKTDET AGALHGLTTW
AFTTLLVLYL LTTAVGSIVG GAFSGVASAV GGLGQTVAQT AAPMIAEANP LDAIERQVRS
TGTDAEALNN AAITSIRALV TGNESEAEAA REKAAQALAS ARNIPVEEAR TQVTQMEEQY
TQAVERTKQE AIDAADAAAS AVSAGALVAF LALVLGAVAG WFGGHSGVAH PVIVDRLLPG
RRRL