Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_5665 |
Symbol | |
ID | 5319967 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009621 |
Strand | + |
Start bp | 632333 |
End bp | 633421 |
Gene Length | 1089 bp |
Protein Length | 362 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640777397 |
Product | hypothetical protein |
Protein accession | YP_001314329 |
Protein GI | 150377734 |
COG category | [R] General function prediction only |
COG ID | [COG0628] Predicted permease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAAGAAA TGCGTAGTGA TCACGGTCAG CACCAGAAAA TCATCGAGAT CGCCCTGGCA TTGCTGCTGG TGTCCATACT GATTGCCGCG ACCTTCTGGG TATTGCTACC CTTTGTCGGG GTCCTGACCT ATGCGGTCAT TCTTGCCACA GCCACGGCTG GGTTGTTTGA TCGCATGGTT GACCTGCTGA ACGGAAGGCG CCGCCTGGCT GCGGTGATAT TCGGCGCTGT CGCCGCGACT ATTACCGTCG TGCCGCTGAT CTTCCTATGT TCTTCGGTTG CCAGCCAGTT GGGCGTTGCC GGAGCGTGGC TGAGTGCAGC GAGCACCCGC GGAATCCCCA ACCTGCCCGA GTGGGTTGCA GGACTTCCGC TGGTCGGAAG CAAGGCAGCG GCAGCGTGGC AGGAACTGCA GCGCGAAGGC TTGGAGTTGT TGGAGCGGTA TCAACCCCAG CTCGCCGCTG CGGGGCGCTG GCTCCTCAAT CTCGGGACGG GTCTTTTGCT GGCTGTCCTT GAAATTTTCG TGGGTGTCGT GTTGGCCGCG ATATTTCACG CATCGCGCAC CTGGGCGTTG GGTTTTGTAT CGGCCATCAT GGTACGCATC GTCGGGCCAA AGGGGCCGGA ACTGCTGAGT GCCGCGGGAA AGGCCATAAG CGGCGTTGCA ATCGGCGTAA TTGGAACGGC CCTGCTCGAG GGCGTGTTGG CCTGGATCGG CTTCGTAATC GCCGGCGTTC CTGGAGCGGT TGCCTTGGCC GCCGCAACGT TCTTTCTGGC GGTGATTCAG ATTGGACCGC TTCTGGTGTG GTTGCCGGTG GCGATCTGGC TGGGCGCCGA GGGACAGACC GGTTGGGCGA TTTTCATGGT TGCATGGGGG ATCATTGTGC TCATGGGCAC AGACAATATC GTCAAGCCCA TGCTGATCGC GCGTAGCGGC CAGTTACCGA TGCTCGTGCT GTTCATCGGG GTCATCGGCG GCCTGGCAGC ATGGGGCTTT ACCGGCATGT TTATCGGCGC GACGACGCTG GCAGTGCTTT GGACTGTGTT GCAGGCTTGG CTCGGCACTA ACAAGGGGCC AGTCTCTGCC ACCTCCTGA
|
Protein sequence | MQEMRSDHGQ HQKIIEIALA LLLVSILIAA TFWVLLPFVG VLTYAVILAT ATAGLFDRMV DLLNGRRRLA AVIFGAVAAT ITVVPLIFLC SSVASQLGVA GAWLSAASTR GIPNLPEWVA GLPLVGSKAA AAWQELQREG LELLERYQPQ LAAAGRWLLN LGTGLLLAVL EIFVGVVLAA IFHASRTWAL GFVSAIMVRI VGPKGPELLS AAGKAISGVA IGVIGTALLE GVLAWIGFVI AGVPGAVALA AATFFLAVIQ IGPLLVWLPV AIWLGAEGQT GWAIFMVAWG IIVLMGTDNI VKPMLIARSG QLPMLVLFIG VIGGLAAWGF TGMFIGATTL AVLWTVLQAW LGTNKGPVSA TS
|
| |