| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5658 |
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| Symbol | |
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| ID | 5319960 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | + |
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| Start bp | 623771 |
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| End bp | 624715 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640777392 |
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| Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
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| Protein accession | YP_001314324 |
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| Protein GI | 150377729 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.521536 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCTCA TCTTAGCCTC TGATCTCAAG ACGCACTACA AGACGCGCGA CGGACTGCTG
CGTTCGGTCG ATGGCGTCGA TCTCGTGGTC GAGCGTGGCG AGACGGTCGG GCTTGTCGGC
GAAAGCGGTT GCGGCAAGTC GACGCTCGGC AAGACGCTTC TGCGCCTGGT CGATCCGACC
GAGGGGCGGA TCGAGTTCAA GGGCGAGGAC ATCACGACAC TCGATCAGGG TCGGCTCAGA
AACGTTCGCA AGTCGATCCA GATGATCTTC CAGGATCCGT TCGCGTCGCT CAATCCGCGA
CATACGATCG GTGAAATCCT GGAAGCGCCG CTAATCGTGC ATAAGGCCGG CAATAGGCCG
GCGCGCCGTC GCACCGTCGC CGGCATCATT GCCAAGGTGG GGCTGCCTGC CGACGCCATC
AATCGCTATC CCCACGAATT CTCTGGCGGC CAGCGGCAAA GGATCGGCAT CGCCCGCGCG
CTTCTGCTCA ATCCGGATCT GATCGTCTGC GACGAGCCCG TTTCGGCGCT CGACCTGTCG
ATCCAGGCAC AAATCCTGAA CCTTCTGGTG GAGATGAAGA AGGAGTTTGG TCTCTCCTAT
CTCTTCATCA GCCATGACCT GTCGGTGGTG CGCTATTTCT GCGACCGGGT GCTGGTCATG
TATCTCGGCC GGATCGTCGA AAGCGCCGAC AACGAGACGC TGTGGTCGGA CCCGCGCCAT
CCTTACACGC GCGCCCTGAT GGCCGCCGTT CCCGATCCGT CGCGGCCGCG GCAGGCGGCT
CCCCTCGGCG GCGATTTGCC AAGCCCGAGC AACATTCCGT CGGGCTGTCG GTTCCACACC
CGCTGCCCGC TGGCGACCCA GCTTTGCCGT GTCGCCGATC CCGAATTCCG CTCCATCAAG
CCCGGCCACC AGGTGGCCTG TCATGTCGCG GACCAGACCA ATTGA
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| Protein sequence | MPLILASDLK THYKTRDGLL RSVDGVDLVV ERGETVGLVG ESGCGKSTLG KTLLRLVDPT
EGRIEFKGED ITTLDQGRLR NVRKSIQMIF QDPFASLNPR HTIGEILEAP LIVHKAGNRP
ARRRTVAGII AKVGLPADAI NRYPHEFSGG QRQRIGIARA LLLNPDLIVC DEPVSALDLS
IQAQILNLLV EMKKEFGLSY LFISHDLSVV RYFCDRVLVM YLGRIVESAD NETLWSDPRH
PYTRALMAAV PDPSRPRQAA PLGGDLPSPS NIPSGCRFHT RCPLATQLCR VADPEFRSIK
PGHQVACHVA DQTN
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