| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5657 |
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| Symbol | |
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| ID | 5319959 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | + |
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| Start bp | 622792 |
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| End bp | 623793 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640777391 |
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| Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
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| Protein accession | YP_001314323 |
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| Protein GI | 150377728 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.991753 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGTCGC TGCTGCTTCA GGTCGAGAAC CTCACTATTG GCTTTCCGCG CGCCGAACCG
GTCCGCAACC TGTCTTTTGA GGTAAGGGCA GGCGAGACGC TGGCGATCGT CGGAGAGTCC
GGTTCCGGCA AATCGCTGAC GGCACTCGCC TTGATGCAAT TGCTGCCGCG TGCAGCAGCT
GTCATCAGCG GCCGAATTAT CTTCGATGAC CGCGATCTTC TGGGTCTCGA TGCGCGCGAG
ATGCGACACT TGCGCGGGCG CGACATCGCA ATGATCTTTC AAGAGCCGAT GACGAGCCTC
AATCCGGTCA TGTCGATCGG TCGCCAGATC GGTGAAGTGC TGAAGGCGCA TGAAAAGCTG
TCTGGCAGGG CGGCGCGAGA ACGGGCGATC GAGCTTTTGA AGCTCGTGCG CATACCGGCC
GCCGAAAAAC GCGTCGACGA CTATCCGCAC CAACTGTCGG GCGGCATGCG GCAGCGGGTC
ATGATCGCCA TGGCAGTTGC CTGCCGGCCG AAACTGCTGA TAGCAGACGA ACCGACGACG
GCGCTGGATG TAACGATCCA GGCGCAGGTG CTCGACCTGC TCGACACCCT GCGACGTGAA
CTGCAGATGG CGGTCGTGCT GATCACCCAT GATCTCGGCG TCGTCGCACA ATGGGCCGAC
AGGGTCGTCG TCATGTATGC CGGCCGTAAG GTAGAGCAGG CCTTGCCCGG CGAGCTCTTC
AACGATCCGC TGCATCCCTA TACGCGCGGG CTGCTTTCGG CCTCGCCGCG CTTGAAGCAC
GACTTTCACT ATTTGGAAGG TCCGCTGACC GAGATCTCGG GTTCGATCGT CTCGGCGGCA
GGCGAGGTCG GCTGTCCCTT CAGGCCGCGC TGTTGCCAGG CGCGCGCGAG CTGCGGCCAT
CAGGTGCCGC CCTTGATTGC TCAAACGCCG GATCGCCTTG TTGCCTGCCC GTTCACCTCG
TCCCTCAAGG CCGTCCCTGA TGCCGCTCAT CTTAGCCTCT GA
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| Protein sequence | MTSLLLQVEN LTIGFPRAEP VRNLSFEVRA GETLAIVGES GSGKSLTALA LMQLLPRAAA
VISGRIIFDD RDLLGLDARE MRHLRGRDIA MIFQEPMTSL NPVMSIGRQI GEVLKAHEKL
SGRAARERAI ELLKLVRIPA AEKRVDDYPH QLSGGMRQRV MIAMAVACRP KLLIADEPTT
ALDVTIQAQV LDLLDTLRRE LQMAVVLITH DLGVVAQWAD RVVVMYAGRK VEQALPGELF
NDPLHPYTRG LLSASPRLKH DFHYLEGPLT EISGSIVSAA GEVGCPFRPR CCQARASCGH
QVPPLIAQTP DRLVACPFTS SLKAVPDAAH LSL
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