Gene Smed_5649 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_5649 
Symbol 
ID5319951 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp614385 
End bp615035 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content63% 
IMG OID640777383 
Producthypothetical protein 
Protein accessionYP_001314315 
Protein GI150377720 
COG category[R] General function prediction only 
COG ID[COG2910] Putative NADH-flavin reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.054314 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.986235 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCATCG TCGTCTTCGG CGCTTCCGGA AACATCGGCA GCGACATCCG CAAGGAGGCC 
TTGTCGCGCG GGCACCGCGT GACAGCCGTG ACGCATTCCT CAGAGCTGGA GCCTGCCGAA
CGCCTCACGG TGCTGAAGGC GGATATCGCC GATCCGGAGG AGGTGGCAGG AATCGTCGGC
GGTCACGATG CGGATATCAG CGCCTACGGC CCCGGTCTGC GCAGCCATTC GGCGGAGAAT
GCCGCTGTTC TCATCGAGAA AGCCCAAGTT TCCCTGTTCG AAGGCGTCAA GCGCGCCGGC
GTCCGCCGCA TCATCATTGT CGGCGGGGTC GGTAGCCTGA AGGCAAGCCC CGGCGTCGAC
GTGGTCGACA GCGATTTTTA CCCCGCGGAT CACAAGGCCC ACACACTGCG CAACCGGGAG
ATCCTGCGCA GCCTGAAGCG TGGAGACCAT GACCTCGACT GGACCTATGT CTCCCCGCCT
CTATCCATCA AGGCGGGCGA ACGAACCGGC CGTTTCAGGC TCGGCGAAGA TGCGCTTCTG
CGTGACGAAG CAGGTGAGAA CCGCATCTCC GAAGCCGATT TCGCCATCGC CATACTCGAT
GAACTCGAGA AGGGACAATC CATCCGCCGC CGCTTCACCG CGGCCTATTG A
 
Protein sequence
MSIVVFGASG NIGSDIRKEA LSRGHRVTAV THSSELEPAE RLTVLKADIA DPEEVAGIVG 
GHDADISAYG PGLRSHSAEN AAVLIEKAQV SLFEGVKRAG VRRIIIVGGV GSLKASPGVD
VVDSDFYPAD HKAHTLRNRE ILRSLKRGDH DLDWTYVSPP LSIKAGERTG RFRLGEDALL
RDEAGENRIS EADFAIAILD ELEKGQSIRR RFTAAY