Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_5649 |
Symbol | |
ID | 5319951 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009621 |
Strand | - |
Start bp | 614385 |
End bp | 615035 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640777383 |
Product | hypothetical protein |
Protein accession | YP_001314315 |
Protein GI | 150377720 |
COG category | [R] General function prediction only |
COG ID | [COG2910] Putative NADH-flavin reductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.054314 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.986235 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCATCG TCGTCTTCGG CGCTTCCGGA AACATCGGCA GCGACATCCG CAAGGAGGCC TTGTCGCGCG GGCACCGCGT GACAGCCGTG ACGCATTCCT CAGAGCTGGA GCCTGCCGAA CGCCTCACGG TGCTGAAGGC GGATATCGCC GATCCGGAGG AGGTGGCAGG AATCGTCGGC GGTCACGATG CGGATATCAG CGCCTACGGC CCCGGTCTGC GCAGCCATTC GGCGGAGAAT GCCGCTGTTC TCATCGAGAA AGCCCAAGTT TCCCTGTTCG AAGGCGTCAA GCGCGCCGGC GTCCGCCGCA TCATCATTGT CGGCGGGGTC GGTAGCCTGA AGGCAAGCCC CGGCGTCGAC GTGGTCGACA GCGATTTTTA CCCCGCGGAT CACAAGGCCC ACACACTGCG CAACCGGGAG ATCCTGCGCA GCCTGAAGCG TGGAGACCAT GACCTCGACT GGACCTATGT CTCCCCGCCT CTATCCATCA AGGCGGGCGA ACGAACCGGC CGTTTCAGGC TCGGCGAAGA TGCGCTTCTG CGTGACGAAG CAGGTGAGAA CCGCATCTCC GAAGCCGATT TCGCCATCGC CATACTCGAT GAACTCGAGA AGGGACAATC CATCCGCCGC CGCTTCACCG CGGCCTATTG A
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Protein sequence | MSIVVFGASG NIGSDIRKEA LSRGHRVTAV THSSELEPAE RLTVLKADIA DPEEVAGIVG GHDADISAYG PGLRSHSAEN AAVLIEKAQV SLFEGVKRAG VRRIIIVGGV GSLKASPGVD VVDSDFYPAD HKAHTLRNRE ILRSLKRGDH DLDWTYVSPP LSIKAGERTG RFRLGEDALL RDEAGENRIS EADFAIAILD ELEKGQSIRR RFTAAY
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