| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5634 |
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| Symbol | |
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| ID | 5319936 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 599823 |
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| End bp | 601697 |
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| Gene Length | 1875 bp |
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| Protein Length | 624 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640777376 |
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| Product | integral membrane sensor signal transduction histidine kinase |
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| Protein accession | YP_001314308 |
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| Protein GI | 150377713 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.469623 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTCGAG CCTGCAGGGT TCCACCACGC CAGACTGTCA TCGGATTTTT GTGTCTTCTG
TTCGTCTTGA TCATTCCGAC AGTGGAAACC TGCTCGGCGG AAATCATCGG CCGGGTTCCG
CGCGTCCTCA TTCTCTATCC CTATGACGAG AGGCTTCCCG CGACGACCTT CGCAGGCGAG
ACAGCACGGG CACGGCTGCT AGAGTCGACC GAAGGCCTGG TCGACCTGTT CTCGGAGTTT
CTCGACCTTT CGAGATTTCC CGAGAAAGTT CACATCGACC GAATGGCGCG GTATCTCGGC
GAGAAATACC AAGAACGACG TCCGGATGTG GTGATTGCGA TCGGTGAGGA GGCAACGAGC
TTCATCATCA AGTACCGCAA CGCGATCGCT CCCGAAGCGA AGATCGTGTT CTCTGGTTTT
AGCGGCGCCG ACGCCGCCAA GATGAAGCTG CCAGACGACG TATTTGGAGC CTTCAGCGAC
TATGACATCG CGAAGACGCT CGCCATGGCG CGCCGACTCC AGCCGGACGC CCGCGAACTG
TTCATCATCG GGGGGTCCGC ACCCTTCGAT CGTTCCTGGA TCGCGACGGC GCGCAAGGAT
CTTGCCGGCG CCGCGGGCGG TCTTAAACTG ACTTACTTCG AGGATCTCAC GATCGATGAA
TTCGTGGATC GCGCCTCTCG TGTGCCGGCG GGAAGTATCA TTCTGGTGCT GACCATTCTC
AGTGATCGCA GCGGCCGAAA CTTCATTCCG CGGGACGCGC TTGAACGGAT AGCCGGCAAG
GCCAACGCTC CCGTGTATGG GCCCTATGCC ACTTACATCG GCCACGGCGC AGTCGGCGGC
AACACGGTCA CCTTCGAGTC GATGGGAGCG GCTGTAGCCG AACTGGCCGT CGCCGCGATT
GCCGGAAAGC CGATTGCGAG TGTCAAGGTA CCGCAAACCT ATGTGGCCGA TGCGAGACAG
CTGAAACGCT GGGGGTTGCC GGAGAGCGCT CTCCCATCCG GTACGGTCCA GAGCTTTAAA
GAGAAAAGCC TTTGGGAACA ATACTGGCCA GCGATCGTCG GTATTGTCGC CGCGCTTGCG
CTTCAGGCCG TGATCATCAC AGGTCTTCTG GTGGAGCGGC ATCGTCGGCG GGGCGCGGAG
CAGGAATCGC GTCTCCGCCT CCTCGAATTA GTGCATCTCA ACCAGTCGGC AACGGCGGGA
GCCCTATCGG CATCGATCGC TCATGAACTG AGCCAACCGC TCGGCGCAAT CCGCAGCAAT
GTCGAAACCG CTCAAGCCCT GCTTTGGAAC ATGAATCCGA ATATCGATCT CGTCCAGCAA
ATTCTCGCCG ATATCCGCGA CGACGATCAG CGTGCCAGCG ATATTATTGT TCGGCTGAGA
GGACTGCTGA AGAAACGAAG TGAGATCGAC TGGCAGGAGT TCGACCTCAA TGACGTGATC
AGCAGTGCCA TTCAGATTCT TCACGCCGAG GCCGAACAAA AACGCGTCGT GGTCAGTTCA
AAACAGCCGG CCCGGAAGCT GCCGGTGCGG GCCGACAAGG TGCATCTCCA GCAGGTCATT
CTCAATCTCG CCACCAATGC GATCGACGCC ATGGTCGATG CGGCCACGAC GCACCGAGAG
CTTGTCTTCC AGACCGCACT GATGGAGGAA TCCAAGGTGG TGCTGTCTAT TTCGGACACC
GGTCGCGGCA TCCCCAGGGA TCAGCTCGAC AGCGTTTTCA ATGCGTTTTA CACGACCAAG
CCGGCGGGCA CTGGGCTTGG ACTTTCCATC GCCCGCGCGA TAATTGAAAC CTATGGCGGC
AAGATATGGG CAGACAATCG CGCTGAAGGC GGCGCTGTTT TTCGCTTCGT CCTGCCCCTT
GCCCAGCATG GATGA
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| Protein sequence | MVRACRVPPR QTVIGFLCLL FVLIIPTVET CSAEIIGRVP RVLILYPYDE RLPATTFAGE
TARARLLEST EGLVDLFSEF LDLSRFPEKV HIDRMARYLG EKYQERRPDV VIAIGEEATS
FIIKYRNAIA PEAKIVFSGF SGADAAKMKL PDDVFGAFSD YDIAKTLAMA RRLQPDAREL
FIIGGSAPFD RSWIATARKD LAGAAGGLKL TYFEDLTIDE FVDRASRVPA GSIILVLTIL
SDRSGRNFIP RDALERIAGK ANAPVYGPYA TYIGHGAVGG NTVTFESMGA AVAELAVAAI
AGKPIASVKV PQTYVADARQ LKRWGLPESA LPSGTVQSFK EKSLWEQYWP AIVGIVAALA
LQAVIITGLL VERHRRRGAE QESRLRLLEL VHLNQSATAG ALSASIAHEL SQPLGAIRSN
VETAQALLWN MNPNIDLVQQ ILADIRDDDQ RASDIIVRLR GLLKKRSEID WQEFDLNDVI
SSAIQILHAE AEQKRVVVSS KQPARKLPVR ADKVHLQQVI LNLATNAIDA MVDAATTHRE
LVFQTALMEE SKVVLSISDT GRGIPRDQLD SVFNAFYTTK PAGTGLGLSI ARAIIETYGG
KIWADNRAEG GAVFRFVLPL AQHG
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