Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_5615 |
Symbol | |
ID | 5319917 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009621 |
Strand | + |
Start bp | 582109 |
End bp | 582762 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640777359 |
Product | hypothetical protein |
Protein accession | YP_001314291 |
Protein GI | 150377696 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.90828 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCAATT CGCAAGCACC TGCACCCGAA GACCTGCCGT CCTCCGGCCA GCTCATCCGA TCGACCATTG CCGCCGCGGC CGCGGCCGCC GCGATCCTCG TGACGGTCGT GCTGCCATCC GAGTACGGCA TTGATCCGAC CGGAGCTGGC TCCGTGCTGG GGCTCACCGA GATGGGCGAG ATCAAGACCC AGCTCTCGGA GGAAGCGGAA GCCGACCGCC GCCAGAGCGA AAGCGGAGAG GCGAAGCCCG CTTCGGGCCA ACCGGAAACC CAACAGGACT CGTTCCTGAT AGACCGCATC TTCCGCGAGA TGTTCGTCGG AACGGCCAAT GCTCAGGAGG TTAGGAAGGA CGAGATGTCC GTGACGCTGA AGCCAGGTGA AGGAACCGAG ATCAAGCTGA CGATGGCGGC CGGTGCCAAG GTAACCTACT CCTGGAGCGC CAACGGCGGC GTCGTGAACT TCGACATGCA TGGCGACGGC GGTGGCGAAA GCACCAGCTA TGAGAAGGGG CGCGGCGCTC CGGGAGCCGA AGGCGTTCTC GAGGCGGCAT TCAACGGCAA GCACGGGTGG TTCTGGCGCA ACCGGACCGA TGCCGATTTT ACCGTGACGC TGAAAACAGA AGGAAGCTAC AGCGACATTA ACAAGATGAT GTGA
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Protein sequence | MFNSQAPAPE DLPSSGQLIR STIAAAAAAA AILVTVVLPS EYGIDPTGAG SVLGLTEMGE IKTQLSEEAE ADRRQSESGE AKPASGQPET QQDSFLIDRI FREMFVGTAN AQEVRKDEMS VTLKPGEGTE IKLTMAAGAK VTYSWSANGG VVNFDMHGDG GGESTSYEKG RGAPGAEGVL EAAFNGKHGW FWRNRTDADF TVTLKTEGSY SDINKMM
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