Gene Smed_5614 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_5614 
Symbol 
ID5319916 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp581353 
End bp582084 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content59% 
IMG OID640777358 
Producthypothetical protein 
Protein accessionYP_001314290 
Protein GI150377695 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.85901 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAAC CACCTCTCGC AGGCGGCAGC CGCGCTTTTG CGCCCTGCTC GCTCGCGCTC 
CAGCTCGCTA TCGCCATCTT TTCGCTTTTG GCTTTCGCGG GCACGGCGGC CGCCCATGCT
GTCGCGGAAG GCGACAAGGG CTACATCCAG GAGATCACGG GCGTCCATCT GATCCCGTTC
GTCTATCTAG GAGCGAAGCA CATGGTGACC GGATACGATC ACCTGCTGTT TCTCTTCGGC
GTGATCTTCT TCCTCTACCG GCTGAAGCAC ATCGCCGTCT ATGTAAGCCT CTTCGCCGTC
GGCCATTCGA CGACGATGCT GCTCGGCGTC TATTTCGGCT GGAACGTCAG TTCCTACCTG
ATCGACGCGA TCATCGGCCT TTCCGTCGTC TACAAGGCGC TCGACAATCT CGGGGCCTTC
CAGCGCTGGT TCGGATATCA GCCCGACACC AAGCTCGCGA CGTTGATCTT CGGCTTCTTC
CACGGCCTCG GCCTGGCGAC GAAGATTCTG GAGTACGAGA TCGCGCAAGA CGGACTCGTC
CCCAACCTTC TCGCCTTCAA TGTCGGTGTC GAGATCGGCC AGCTCATCGC TCTCGCGATG
ATTTTGATCG CGATGAGCTA TTGGAGAAAG ACACCGAGCT TTCTCCAACA CGCCTATGCC
GCCAACGTGC TGATGATGGC CGCCGGCTTC GTGCTGATCG GTTATCAGCT CACCGGCTAC
TTTGTTGCCT AA
 
Protein sequence
MKQPPLAGGS RAFAPCSLAL QLAIAIFSLL AFAGTAAAHA VAEGDKGYIQ EITGVHLIPF 
VYLGAKHMVT GYDHLLFLFG VIFFLYRLKH IAVYVSLFAV GHSTTMLLGV YFGWNVSSYL
IDAIIGLSVV YKALDNLGAF QRWFGYQPDT KLATLIFGFF HGLGLATKIL EYEIAQDGLV
PNLLAFNVGV EIGQLIALAM ILIAMSYWRK TPSFLQHAYA ANVLMMAAGF VLIGYQLTGY
FVA