| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5605 |
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| Symbol | |
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| ID | 5319907 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 573804 |
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| End bp | 574928 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640777350 |
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| Product | acetylornithine deacetylase |
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| Protein accession | YP_001314282 |
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| Protein GI | 150377687 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01892] acetylornithine deacetylase (ArgE) |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.227908 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.344951 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAGGCAG CGGAAATACT AGGAAAACTC GTCGGCTTTC GCTCCGTCGT GGGGCTACCT
AACGACGACG CCGTGTCCTG GATCCGGGGC TATTTGGAAT GCCATGGCAT CGCAGTGGAT
GTCCTTCCCG GTCCAGAGGG CGATCGGTCC AACATCTTCG CCACCATCGG GCCAAAAGAG
GCGCATGGCT ATATCCTCTC CGGCCATATG GACGTCGTTC CGGCAACCGA GGCCGGCTGG
ACGAGCGATC CCTTCATCCT TCGCGCCGAG GGGGGCCGGC TCTATGGCCG CGGCACCACC
GATATGAAAG GTTTCCTTGC CGCCGGTCTG GCCGCCGTTC CGAAGCTTGC GGCGATGCCA
CTTCGCCGGC CGCTGCACCT CGCCTTCTCC TATGATGAGG AGGCCGGCTG TCGCGGCGTA
CCCCACATGA TCGCACGCAT GCCGGAACTT TGCCGCCAGC CGCTCGGCGC GATCATCGGC
GAGCCGAGCG GCATGCGCGC TATCCGTGCC CACAAGGGCA AGGCGGCGGC ACGGCTGACG
GTCAGGGGGC GCTCCGGGCA TTCTTCGCGC CCGGATCAGG GACTGAATGC GATACACGGC
GTAGCAGGCG TCCTGACCCA GGCGGTCGCG GAAGCCGTCC GGCTGGCCGG CGGCCCCTTC
GAGCATGTCT TCGAACCGCC CTACTCCTCC CTCCAGATCG GAACGGTAAA GGGCGGTCAG
GCGGTCAACA TTATTCCGGA CAGCTGCGAG GTCGAGTTAG AGGCACGAGC AATTTCCGGT
GTCGACCCGG CAGAGCTGCT GACGCCGGTG CGAAAGATCG CCGAGGCGTT GACGGCACTA
GGCTTCGAGG TGGAGTGGCA GGAACTCAGT GCCTATCCGG CGCTTTCACT TGAACCTCAC
GCTCCGCTGG CGGCACTGCT CGAGGCGTTG ACCGGCCGCG AGCCTCTCCC CGCCGTCAGC
TACGGTACCG AGGCGGGCCT TTTCCAACGG GCTGGCATCG ACGCGATCAT CTGCGGCCCC
GGTGACATCG GCCGCGCCCA CAAGGCGGAC GAATACATCC TCATCGACGA GCTTATGGCA
TGTCAAGCGA TGATAGAGGC GCTCGGCGCC CACTGCATAG CGTAA
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| Protein sequence | MQAAEILGKL VGFRSVVGLP NDDAVSWIRG YLECHGIAVD VLPGPEGDRS NIFATIGPKE
AHGYILSGHM DVVPATEAGW TSDPFILRAE GGRLYGRGTT DMKGFLAAGL AAVPKLAAMP
LRRPLHLAFS YDEEAGCRGV PHMIARMPEL CRQPLGAIIG EPSGMRAIRA HKGKAAARLT
VRGRSGHSSR PDQGLNAIHG VAGVLTQAVA EAVRLAGGPF EHVFEPPYSS LQIGTVKGGQ
AVNIIPDSCE VELEARAISG VDPAELLTPV RKIAEALTAL GFEVEWQELS AYPALSLEPH
APLAALLEAL TGREPLPAVS YGTEAGLFQR AGIDAIICGP GDIGRAHKAD EYILIDELMA
CQAMIEALGA HCIA
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