| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5604 |
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| Symbol | |
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| ID | 5319906 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 572869 |
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| End bp | 573792 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640777349 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding |
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| Protein accession | YP_001314281 |
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| Protein GI | 150377686 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.310496 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCTTCC TGTTCAACTC CGATGCGAAG CGCGGCGCGA TTTTCGCCGA AGCATTCGCG
CGCAAGCTGC CTGACATTCC TTTTGCCATG AACCCGGCAG CGGTCGATCC CGACGCCGTG
CGCTACCTGA TCACCTGGAC GGTGCCGGAC AATCTCGCAC GCTATCGAAA CCTCGAAATC
CTCTTCTCGA TCGGCGCCGG CGTCGACCAG TTCCGCATCG ATGCGGTGCC GCCGCATGTG
CGGGTGGTGC GCATGGTCGA GGACGGCATC GTTCGAATGA TGCAGGAATA TGTGACGCTT
GCCGTCCTCG CGCTTCACCG CGACCTGCCG GCCTATCTCG AGCAGCAGCG AGGCCAAAAT
TGGAAAGCCA TGGCGCCGGT CCAGGCGGAC GAACGCCGCG TAGGCGTGCT CGGGCTCGGC
ATACTCGGAA CTGCGGTACT CGATCGGCTG AAGCCTTTCG GCTTTCCGCT CTCCGGCTGG
AGCCGCAGCC CGCATGAAAT CGAAGGCGTG AGGTGCCTAA GCGGCCGGAA CGGTCTCGAC
ACTTTGCTGG GCTCGACCGA CATTCTCGTC TGCCTCCTGC CGCTCACCGA AGAGACGCGC
GGCTTCCTTA ACGCCAAACT GTTTGCTCGG CTCCCGACCG GTGCTGCACT CGTCCATGTC
GGCCGCGGCC CTCAACTCGA TCGTGACGCA CTTATCGAGG CACTTGATAA CGGCCGTCTC
TCCGGCGCCA TGGTCGATGT GACCGACCCC GAACCGCTTC CTTCTGGTCA TCCCTTCTGG
GCCCACTCGA AGATCCTGCT GACGCCGCAC ATCGCGAGCG TCACCCAGCC GGAAACCGCC
GCCAAAGCCG TGATCGAGAA CATCAAACGG CATCGGTCAG GTCTCGAGCC GATCGGGCTG
GTCGACCGTC GCCGCGGCTA CTGA
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| Protein sequence | MAFLFNSDAK RGAIFAEAFA RKLPDIPFAM NPAAVDPDAV RYLITWTVPD NLARYRNLEI
LFSIGAGVDQ FRIDAVPPHV RVVRMVEDGI VRMMQEYVTL AVLALHRDLP AYLEQQRGQN
WKAMAPVQAD ERRVGVLGLG ILGTAVLDRL KPFGFPLSGW SRSPHEIEGV RCLSGRNGLD
TLLGSTDILV CLLPLTEETR GFLNAKLFAR LPTGAALVHV GRGPQLDRDA LIEALDNGRL
SGAMVDVTDP EPLPSGHPFW AHSKILLTPH IASVTQPETA AKAVIENIKR HRSGLEPIGL
VDRRRGY
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