Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_5603 |
Symbol | |
ID | 5319905 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009621 |
Strand | - |
Start bp | 572428 |
End bp | 572781 |
Gene Length | 354 bp |
Protein Length | 117 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640777348 |
Product | protein of unknown function DUF861 cupin_3 |
Protein accession | YP_001314280 |
Protein GI | 150377685 |
COG category | [R] General function prediction only |
COG ID | [COG3450] Predicted enzyme of the cupin superfamily |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.919827 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.384238 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCGCTCT TGAAAACCAT CGAGACCAAC CCTTCTTTCG CGCCGCGCGA GTCCAGCCCG CTCCCCGACC GTCTGATCTC CGGCAATCCT ACCTTCAAGA CCTGGGCACA GGACGTCGCC CGCGGCGAGA TAGTCCACAC CGGCGTCTGG GAAGCGACAC CCGGCGAGAC GCGCTCGATC AAGGGGGAGA CCTTCGAGTT CTGTCACATT CTTTCCGGTG TCGTCGAACT CACGCCGGAA AACGGGGAGC CGGTCGTCTA CAAGAGCGGC GACAGCTTCG TCATGAAGCC GGGTTTCGTC GGCATCTGGA AGACAATCGA GACGGTGCGC AAGATCTACG TGACCGTGAT GTGA
|
Protein sequence | MSLLKTIETN PSFAPRESSP LPDRLISGNP TFKTWAQDVA RGEIVHTGVW EATPGETRSI KGETFEFCHI LSGVVELTPE NGEPVVYKSG DSFVMKPGFV GIWKTIETVR KIYVTVM
|
| |