| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5601 |
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| Symbol | |
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| ID | 5319903 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 569542 |
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| End bp | 570585 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640777346 |
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| Product | 3-isopropylmalate dehydrogenase |
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| Protein accession | YP_001314278 |
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| Protein GI | 150377683 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | [TIGR02089] tartrate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.574649 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATGCT ATTCTATCGC ACTCATCCCC GGCGACGGCA TCGGCCGCGA CGTTACGGAT
GCCGCCTGGC ACGTCCTTTC CACCGTCGCC ATGCACTCCG GTTTCACGCT AACCGGTACA
CCTTTTCCCT GGTCCTGCGC CTTCTACAAG GAGACCGGCG CGATGATGCC GGCGGACGGC
ATCGAAGCGC TGCGCCCTTT CGACGCCATC CTGCTCGGCT CCGTCGGCTG GCCGGCGCAG
GTGCCGGATT CCATCTCGCT GCACGGCCTG CTGCTGCCGA TCCGCAAGGC CTTCGTGCAA
TATGCCAATA TTCGGCCGCA TAGACTGCTG CCCGGCGTCG AAGGACCGCT GAGGGCGAGC
GACTTCGATA TCCTCTGCGT CCGCGAGAAC ACAGAGGGCG AATATTCCGG CGCCGGTGGT
CGCGTACATC AGGGCACGCC GGGCGAGGTG GCGGTCGAGA CCTCGATCTT TACGCGCGCG
GGTGTCGAAC GGATCCAACG CTTCGGCTTC GAGCAGGCAC GTCAGCGTCG CGGCAAGCTC
GCCTCGGTGA CCAAATCGAA CGCCCAGAAA TACTCGATGG TGTTCTGGGA TGAGGTCACG
CGAGAGCTCG CTGCCGAATA CCGGGACGTC GAGGTGACGA GCTATCATAT TGATGCCATG
GCCGCTCGCA TGGTGATGGC ACCGGAAAGC CTTGATGTCG TCGTCGCCTC GAACCTCTTC
GGAGACATCC TCACCGACCT CGGCGCTGCC ATACAGGGCG GTTTGGGCTT TGCCGCTTCC
GCCAACATCA ATCCGGACAG AGGTGCCCCC TCCATGTTCG AGCCGGTACA CGGTTCTGCC
CCGGATATCG CCCATCTCGG CATCGCCAAC CCAATCGCCG CCATCTGGTC CGGCGCGATG
ATGCTCGAGC ATCTCGGAGA AAAAGAGGCG GCGGGGATGA TCATAGCCGC GCTCGAAAGA
GCGACCATCC GCGGCATCGG CACCGTTCCG GGAAAAGACA GGACCGAAAC CATCACCGCG
GCTGTGCTCG CCGCGCTCGA TTGA
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| Protein sequence | MKCYSIALIP GDGIGRDVTD AAWHVLSTVA MHSGFTLTGT PFPWSCAFYK ETGAMMPADG
IEALRPFDAI LLGSVGWPAQ VPDSISLHGL LLPIRKAFVQ YANIRPHRLL PGVEGPLRAS
DFDILCVREN TEGEYSGAGG RVHQGTPGEV AVETSIFTRA GVERIQRFGF EQARQRRGKL
ASVTKSNAQK YSMVFWDEVT RELAAEYRDV EVTSYHIDAM AARMVMAPES LDVVVASNLF
GDILTDLGAA IQGGLGFAAS ANINPDRGAP SMFEPVHGSA PDIAHLGIAN PIAAIWSGAM
MLEHLGEKEA AGMIIAALER ATIRGIGTVP GKDRTETITA AVLAALD
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