| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5600 |
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| Symbol | |
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| ID | 5319902 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 568053 |
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| End bp | 569507 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640777345 |
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| Product | succinic semialdehyde dehydrogenase |
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| Protein accession | YP_001314277 |
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| Protein GI | 150377682 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01780] succinate-semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.637375 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGATTGA AGGACAAGAA ACTTTTCCGG CAATTGAGCC TGATCGGCGG TGAGTGGATC
GCCGGCGCTT CGGGCTCGGT CGTCGACGTC GTCGACCCTG CGAACGAGGC CGTTCTCGGC
ACCGTGCCGG ACATGGGAAC GGCCGAAACC CGCGCGGCCA TCGAAGCGGC CAATGCCGCA
TTCGGACCCT GGAAGAAGAA AACGCACGCC GAACGCGCCG CCCTGCTCGA GCGCTGGCAC
GCGCTGATGA TCGAAAACCT CGAAGACCTG GCGCTGCTCG TGACGATGGA ACAGGGCAAG
CCGCTCGAGG AGGCGCGTGG CGAGATCCGC TATGGCGCCG CGTTTGTGAA ATGGTTCGCT
GAAGAAGCCC GCCGCATCGG TGGCCAAACC ATTCCCTCCC CGACGCCGGA CCGCCGCATC
GTCGTGCTGA AGGAAGCGGT CGGCGTCTGC GCCATCGTCA CGCCGTGGAA CTTCCCGAAC
GCGATGATCA CCCGGAAGAT CGCCCCGGCG CTCGCCGCCG GCTGCACGGT GGTCATCAAG
CCGTCGGAGT TCACGCCCTT CTCGGCGCTC GCCCTTGGCG TGCTCGCGGA GCGCGCCGGC
ATTCCGGCCG GTGTCGTCAA TATAGTGACC GGCTTGCCGA CGGCGATCGG TAACGAGTTC
ATGACGAACG AGACGGTACG CAAGATCTCC TTCACCGGCT CGACCCGCGT CGGTTCGCTG
CTGATGCGCG GCGCCGCAGA CAGCGTCAAG AGGCTCTCGC TCGAACTCGG CGGTAATGCC
CCCTTTATCG TTTTCGACGA CGCCGATCTC GATCTTGCAG TCGAAGGCGC GATCGCGTCG
AAGTTCCGCA ACGGTGGTCA GACCTGCGTC TGCGCCAACC GAATTCTCGT GCAGGCCGGC
GTCTATGACG ACTTCGCCGA GAAGCTCGGC GCCCGCGTCA ACGTGATGAA GGTCGGCCCG
GGGACGGAGC CCGGCATCGC GATTGGCCCG ATGATCAATG AGGCTGCCAT CGCCAAGATC
GACCGTCACG TCGAGGACGC GATTGCCAAG GGCGCAAAGA TAGCGGCACG CGGCAGGTCG
CTGACGGAGG GCCGGCAATA TACGGCCCCG ATCGTGCTCA CCGGCGCGAC GACTGAAATG
CTGCTCGCCA CTGAAGAGAC CTTCGGCCCC GTCGCTCCAC TTTTCCGCTT CGAGACCGAG
GACGAGGCGA TCGCCATCGC CAACGGCACG CCCTTTGGGC TGGCCGCCTA TTTCTACACC
GAAGGCCTGA AGCGCTCCTG GCGGGTGGCG GAAGCACTCG AGTTCGGCAT GATCGGCCTC
AATACCGGCG CCATCTCGAC CGAAGTCGCG CCCTTCGGCG GCGTCAAGCA ATCCGGCCTC
GGACGCGAAG GCGCCCAGGT CGGCATTGAG GAATATCTCG AGATGAAGAG CTTCCACATC
GGCGGGCTGG ACTAG
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| Protein sequence | MRLKDKKLFR QLSLIGGEWI AGASGSVVDV VDPANEAVLG TVPDMGTAET RAAIEAANAA
FGPWKKKTHA ERAALLERWH ALMIENLEDL ALLVTMEQGK PLEEARGEIR YGAAFVKWFA
EEARRIGGQT IPSPTPDRRI VVLKEAVGVC AIVTPWNFPN AMITRKIAPA LAAGCTVVIK
PSEFTPFSAL ALGVLAERAG IPAGVVNIVT GLPTAIGNEF MTNETVRKIS FTGSTRVGSL
LMRGAADSVK RLSLELGGNA PFIVFDDADL DLAVEGAIAS KFRNGGQTCV CANRILVQAG
VYDDFAEKLG ARVNVMKVGP GTEPGIAIGP MINEAAIAKI DRHVEDAIAK GAKIAARGRS
LTEGRQYTAP IVLTGATTEM LLATEETFGP VAPLFRFETE DEAIAIANGT PFGLAAYFYT
EGLKRSWRVA EALEFGMIGL NTGAISTEVA PFGGVKQSGL GREGAQVGIE EYLEMKSFHI
GGLD
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