| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5595 |
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| Symbol | |
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| ID | 5319897 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 562322 |
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| End bp | 563035 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640777340 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_001314272 |
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| Protein GI | 150377677 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01428] 2-haloalkanoic acid dehalogenase, type II
[TIGR01493] Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.606287 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGCAAGA GCCTTCCGGA ATTCAAATAC ATGACTTTCG ACGTCGTCGG CACGCTGATC
GACTTCGAAG GCGGCCTCAA GGACTGTCTC GCCGGCATTG CCACCGAGGC AGGTGTCACG
ATAGATGGCG AGGAAGCGCT CAACCTTTAC CGCGCAGCGC GCTATTCCAA GGACGCCGAC
CTCTTCCCGG ACGATCTCGT ACGGGTCTAT CTTGAAATCG CGCCAAAGCT TGGCCTGCCA
GCCGAACCGA AATACGGAGA ACGTTTCAGG GACTCCACGA AGAACTGGAA AGGTTTCGCC
GACAGCGCCG AGGCGCTGGC GCGCCTTGCC GAAGGTTGCC GGCTCATCGC GATGACCAAT
GCCCGTCGCT GGGCCTTTGA TCTCTTTGCC CAGAAGCTGG GCAACCCCTT TCACGCAGCC
TTTACGGCCG ACGATACCGG GACCGAGAAA CCGGACCCCG TCTTCTTCGA GAAGCTCTTC
GATTTCGTCG GCTTGGAAGG AAATTCAAAG GACGACATTC TGCATGTCGC CCAGAGCCAG
TATCACGATA TCGGCATGTC CCGAAAGCTC GGATTGGCCA ACTGTTGGAT CGAGCGTCGC
CACGCACAGA AGGGCTATGG CGGCACGATC GAGCCCGCCG AATTCACCGC GCCCGATTTC
CATTTCACCT CCATGGCCGG TCTCGCCGAT GCCGTGGCCG TCGCACGCGG CTGA
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| Protein sequence | MRKSLPEFKY MTFDVVGTLI DFEGGLKDCL AGIATEAGVT IDGEEALNLY RAARYSKDAD
LFPDDLVRVY LEIAPKLGLP AEPKYGERFR DSTKNWKGFA DSAEALARLA EGCRLIAMTN
ARRWAFDLFA QKLGNPFHAA FTADDTGTEK PDPVFFEKLF DFVGLEGNSK DDILHVAQSQ
YHDIGMSRKL GLANCWIERR HAQKGYGGTI EPAEFTAPDF HFTSMAGLAD AVAVARG
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