| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5593 |
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| Symbol | |
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| ID | 5319895 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 559604 |
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| End bp | 560554 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640777338 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001314270 |
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| Protein GI | 150377675 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.570191 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.169203 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACAACC GGGTCCTATC CCTTGTGCTG AGCAGATTGC TCATCGCCGT GATCACCTTG
GTGATCGTCT CCTTCGCCGT CTTCTTCGCG ACGACGCTCC TGCCGGGGGA CACCGCGTCG
ATCCTGCTCG GTCAGGCCGC CACGCCGGAG GCCGTCGAAG GCCTGCGCAA GGCGATGCAC
CTCGACGAGC CGGCAATCTT CCGTTTCCTG CGCTGGATCG TCGGTCTGCT GCAAGGCGAC
CTCGGCATAT CCTATGCCAA CGAGATGCCG GTCGCAGATC TGATTGGCGG GCGCTTCGTC
AATACACTTC AGCTCGCCGG TGTTACCGCC CTCTTCTCTG TGCCGATCGC ACTCACCCTC
GGGATTACGT CGGCGATGCT GCGCGGTTCG CCTTACGACC GGATTGTGAC GGTGCTTACC
ATCGGCGTCA TCTCCGTGCC GGAGTTCATG ATTGCGACCT CCGCGGTGCT GATCTTCGCC
GTTTACCTGA AATGGCTTCC GGCGCTCTCC TTTGCCAATG AGGTGACGTC GCTCACCGAT
CTGCTGCGCA TCTATGCCAT GCCGGTGATC ACGCTCAGCT TCGTCATCTC GGCCCAGATG
ATCAGAATGA CGCGCGCGGC AGTGATCGAG ACGCTGAACA CGCCCTATGT GGAGATGGCT
CTGCTCAAGG GCGCCTCCCG GCCGCGCATG GTGTTTCGCC ATGCCCTGCC AAATGCTCTG
GGGCCGATCG TCAATGCGGT CGCGCTTTCG CTCTCCTATC TGCTCGGCGG GGTCATTATC
GTCGAGACGA TCTTCAATTA TCCCGGTATT GCCAAGCTGA TGGTCGATGC CGTGTCGACC
CGCGATCTGC CGCTGATCCA GAGCTGCGCG ATGGTCTTCT GCCTGGGCTA TCTGCTCCTG
ATCACGACAG CCGACATCAT CGCCATCCTT TCCAATCCGA GGCTACGATG A
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| Protein sequence | MNNRVLSLVL SRLLIAVITL VIVSFAVFFA TTLLPGDTAS ILLGQAATPE AVEGLRKAMH
LDEPAIFRFL RWIVGLLQGD LGISYANEMP VADLIGGRFV NTLQLAGVTA LFSVPIALTL
GITSAMLRGS PYDRIVTVLT IGVISVPEFM IATSAVLIFA VYLKWLPALS FANEVTSLTD
LLRIYAMPVI TLSFVISAQM IRMTRAAVIE TLNTPYVEMA LLKGASRPRM VFRHALPNAL
GPIVNAVALS LSYLLGGVII VETIFNYPGI AKLMVDAVST RDLPLIQSCA MVFCLGYLLL
ITTADIIAIL SNPRLR
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