| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5592 |
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| Symbol | |
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| ID | 5319894 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 558744 |
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| End bp | 559607 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640777337 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001314269 |
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| Protein GI | 150377674 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.754111 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.348601 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAATGA CCCACTCTGA GACCAAGTCT GCCCGGATTT CGGGAACCCG GCTCGGCTAT
CGCTTCAATA TCGTCGGGAT GGTCGGCCTT TCCATCATTC TTTTTTGGGC GCTCGTCGCG
ATCTTCGCGC CGCTGATCAT CCCCTATCCG GTCGGGGAGA TCGTCGATCT CGATTACTTC
GGCCCGATGA GCCGCGACTT CTGGCTTGGT TCCGACTACC TCGGCCGCGA CATGCTTTCA
CGCATCCTGA TGGGAGCCCG CTACACGGTC GGCATCTCGC TTGCGGCAGT CACCATCGCC
TGCTTCAGCG GCGTGGTGCT CGGCATGATC GCAGCGGTCG CCGGCGGGTG GCTCGACACT
ATTCTCAGCC GCCTTCTCGA CGCCCTCAAT TCAATCCCGA GTAAGCTCTT CGGTCTCGTG
GTGGTCGCCG CCGTCGGCTC CTCCATACCC GTGCTGATCC TGACGTTATC GGTGGTATAC
ATCCCCGGCG CCTACCGCTT CGCCCGCGCG CTCGCTGTCA ACATCAACGC GATGGATTTC
ATTACCGTGG CTCGCATCCG CGGCGAGAGC ACGCTTTATC TCATACGCTC GGAGATCCTG
CCGAACATCA TCGGCCCGGT GCTTGCCGAC CTCGGCATCC GCTTCGTCTT TATCGTTCTG
CTGCTCTCGG GCCTCTCCTT CCTTGGCCTC GGCGTCCAGC CGCCCTATGC CGATTGGGGG
GCACTGGTGC GCGAGAACAT CGGCGCCCTT CCCTTCGGCG CACCGGCGGT GATTTTTCCG
TCCTTCGCCA TTGCAAGCCT CACGATCAGC GTGAACCTCC TGATCGACAA CCTGCCGCAG
AAGATCCGCG ATCGGAGCGA ATAA
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| Protein sequence | MTMTHSETKS ARISGTRLGY RFNIVGMVGL SIILFWALVA IFAPLIIPYP VGEIVDLDYF
GPMSRDFWLG SDYLGRDMLS RILMGARYTV GISLAAVTIA CFSGVVLGMI AAVAGGWLDT
ILSRLLDALN SIPSKLFGLV VVAAVGSSIP VLILTLSVVY IPGAYRFARA LAVNINAMDF
ITVARIRGES TLYLIRSEIL PNIIGPVLAD LGIRFVFIVL LLSGLSFLGL GVQPPYADWG
ALVRENIGAL PFGAPAVIFP SFAIASLTIS VNLLIDNLPQ KIRDRSE
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