| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5589 |
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| Symbol | |
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| ID | 5319891 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 554943 |
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| End bp | 556268 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640777334 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_001314266 |
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| Protein GI | 150377671 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.17966 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGCAC CGCTGAAACT CGTCGATACA TCGCCGAAGC TGCCCGAGAC CGCCGATGCC
GTGGTAATCG GCGGCGGCAT CGTCGGCGTG TTTGCGGCCT ATTATCTTGC CCGCCGCGGA
ATGAAGGTCG CGCTCGTTGA GAAGGGACGG ATCGGCGCGG AACAGTCGAG TCGCAACTGG
GGTTGGTGCC GCCAGCAGAA TCGGGACGCC CGCGAATTGC CGATGGCAAC GAAGAGCCTC
GATCTTTGGG AGCGTTTCGC CGCCGAGAGC GGCGAGGACA CCGGTTTCCG CCGCTGCGGG
CTGCTCTACC TCAGCACTAG CGAAGAGGAA CTGGCCGGCT GGGCACGCTG GCGCGATTTC
GCCCGGAACG TCGGCGTCAC CACCCATATG CTCAACAGCG CCCAGGCGAG CGAGCGCGGC
CGCGCAACCG GCAAACCATG GAAGGGCGGC GTCTTTTCGC CGACCGACGG CACCGCCGAT
CCGGCAAGCG CGGCACCCGC GGTCGCGCGT GCGATCCTGA AGCTTGGCGG CACAGTGCAC
CAGTCCTGCG CCGCCCGCGG CATAGAGACA GAAAGCGGTC GCCTGTCCGG TGTCGTCACC
GAGCATGGCA CCATCCGCAC GAAAACGGCC GTCCTTGCCG GCGGCGCCTG GGCCTCCTCC
TTCTGCCGCC AGCTGGGTAT CCGCTTCCCG CAGGCCGCTA TCCGCTCGTC GATCCTTGCC
GTCTCGCCGG GCTCCATCGG CCTTCCGGAT GCGCTGCATA CGGCCGCTGT TTCGGTGACG
CGCCGCGCCG ACGGCGGCTA TACGGTTGCC ATCAGCGGCC GCGGCCGCGT CGACCCGACG
CCTCAGCAAC TCAGGTTCTC GCCGCAATTT CTGCCGATGT TCGTCAAACG CTGGCGCAGC
CTGGCGCCAG GCGGGCTTGA GGGCTTCCAC TCAGGCCATG AGACCTTGGC CCGCTGGCGA
CTGGACGCCC CTACGCCGAT GGAGCGCATG CGCATCCTTG ATCCCGCGGT CGATAAGGCC
ACTATCCGCC TCACCCATTC GCGCGCAGTC GATCTCCTGC CTCCCCTGAA GAACATCAGC
ATCGCCGCCG CATGGGCGGG CTATATCGAC AGCACGCCGG ACGGGGTCCC GGGCATCGGC
GAAATCGCCG CCGTACCGGG TTTCATCCTC GCCGCCGGCT TCAGCGGGCA CGGCTTCGGT
ATCGGTCCGG GCGCCGGCCA CTTGATCGCA GACATCGTGA CCGGTAACGA GCCAATCGTG
GATCCCCGCC CCTACCATCC GGACCGCTTC CGAAAATCCG CCTGGGGTAA AGTCGCTGAC
TTTTAG
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| Protein sequence | MPAPLKLVDT SPKLPETADA VVIGGGIVGV FAAYYLARRG MKVALVEKGR IGAEQSSRNW
GWCRQQNRDA RELPMATKSL DLWERFAAES GEDTGFRRCG LLYLSTSEEE LAGWARWRDF
ARNVGVTTHM LNSAQASERG RATGKPWKGG VFSPTDGTAD PASAAPAVAR AILKLGGTVH
QSCAARGIET ESGRLSGVVT EHGTIRTKTA VLAGGAWASS FCRQLGIRFP QAAIRSSILA
VSPGSIGLPD ALHTAAVSVT RRADGGYTVA ISGRGRVDPT PQQLRFSPQF LPMFVKRWRS
LAPGGLEGFH SGHETLARWR LDAPTPMERM RILDPAVDKA TIRLTHSRAV DLLPPLKNIS
IAAAWAGYID STPDGVPGIG EIAAVPGFIL AAGFSGHGFG IGPGAGHLIA DIVTGNEPIV
DPRPYHPDRF RKSAWGKVAD F
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