| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5584 |
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| Symbol | |
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| ID | 5319886 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 551709 |
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| End bp | 552632 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640777331 |
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| Product | transcriptional regulator, TrmB |
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| Protein accession | YP_001314263 |
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| Protein GI | 150377668 |
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| COG category | [K] Transcription |
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| COG ID | [COG4189] Predicted transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.939474 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.107073 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGGTA AAGTACTCGT GATTGATCCG ATCGAGCGGC AAGACCTCAT CAAAGGTCTC
GCAAGCGACG TTCGCGTAAT GATGTTGAAG TTGCTTCGAT CGAGCGGTCC GAAAAACGTG
AACGAGATCG CGGAGGAACT AAAGCTTCCC CAGTCGACGG CGTCGATCAA CCTGAAGGTG
CTCGAGGATT GCGGACTAAT CTATACTGAG GGACAGCGGG CCAAAAAGGG CAGCCAGAAA
GTCTGTTATT CGGCTTTCCA GGAAATACTC ATTTCGTTTT CAGAGCCAGT GGTTGATCGA
TTAGCGGACG CGATAGAAGT TTCCATGCCG CTTGGTCTAT ATACCCAGTT TGAAGTCACG
GGCCCGTGTG GGATGTGCTC CAAGGATGGC GTCATCGGCC TTCTCGACGT ACCCGACACC
TTCCTCGATC CGGACCGTAT GAAAGCGGGG CTTCTGTGGT TTAACACGGG GTTCGTAGAA
TATCAGTTCC CCAACAACAC CCTGCTCAAG AAGGCTAGAC CTAAGGCGAT CGAGTTCTCG
ATGGAGCTGA GTTCTGAAGT GCCGGGGACG TCCGCAAACT GGCCATCCGA CATATTTCTG
CAGGTCAACG GAATCGAAAT CGGCACGTGG ACGTCGCCTG GCGATTATGG AGATAAAAGA
GGTGCTTTCA CGCCGGACTG GTGGAAGCTC GCGGGTTCAC AGTATGGCAT GCTCAAGAAC
TGGCGCATCA ACGGGCAGGG AAGTTTCGTC GATGGAGTGA AGATATCAAA CATCAACCTC
GATGATCTCG GTCTGGACAA GCATCGTTCA ATCCGGTTGC GGGTTGGCGT CAAGGACGGG
GCCGAGCATC CCGGCGGAAT CAACATTTTC GGCAACGGCT TCGGCAATTA CGACCAGGAT
ATCGTGCTCC GCATTCAACT TTGA
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| Protein sequence | MTGKVLVIDP IERQDLIKGL ASDVRVMMLK LLRSSGPKNV NEIAEELKLP QSTASINLKV
LEDCGLIYTE GQRAKKGSQK VCYSAFQEIL ISFSEPVVDR LADAIEVSMP LGLYTQFEVT
GPCGMCSKDG VIGLLDVPDT FLDPDRMKAG LLWFNTGFVE YQFPNNTLLK KARPKAIEFS
MELSSEVPGT SANWPSDIFL QVNGIEIGTW TSPGDYGDKR GAFTPDWWKL AGSQYGMLKN
WRINGQGSFV DGVKISNINL DDLGLDKHRS IRLRVGVKDG AEHPGGINIF GNGFGNYDQD
IVLRIQL
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