| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5583 |
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| Symbol | |
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| ID | 5319885 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 550099 |
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| End bp | 551607 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640777330 |
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| Product | Alpha-N-arabinofuranosidase |
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| Protein accession | YP_001314262 |
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| Protein GI | 150377667 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3534] Alpha-L-arabinofuranosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.759858 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.105411 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGAGGCTC GGGTTACCGC GCATTCGCGC TATACAATCG CGGACATAGA TAAGCGGCTA
TACGGATCGT TCCTGGAGCA CTTGGGTAGG GCTGTCTATA CAGGCATTTA CGAACCTGGC
CATCCGACGG CGCTCCCCAA CGGGATGCGC AAGGACGTGA TCGATCTCGT GCGGGAACTC
GATACGCCGA TTTGCCGCTA TCCAGGTGGC AATTTCGTGT CGGCCTACAA TTGGGAAGAC
GGCATTGGGC CGAAAGAGGG CCGTCCAACG CGCCTTGATC TCGCATGGCG CACCTCGGAA
TCTAACCAGG TCGGTATCCA TGAGTTCGCC GAATGGGCTG AGGCTGCTGG CACCGAAATG
ATGCTGGCGG TCAATCTGGG CTCGCGCGGC CTGGACGCCG CACGGAACTT CGTCGAGTAC
GTGAACCATC CCGGCGGCAG TCAGTGGTCG GACCTGCGAC GCCAGAACGG GCGCGCGGAG
CCTTGGAATG TCAAGCTGTG GTGCCTTGGC AACGAAATGG ACGGGCCGTG GCAAGTGGGT
CATAAAAGCG CCGCCGAGTA CGGCCACCTT GCAAACGAGA CCGCAAAGGC CATCCGCGCC
TTCGACGACA AGCTTGAACT TGTCGTTTGC GGATCATCCC ACTCCGATAT GGCGACCTAT
CCTCGGTGGG AGGCAACGGT CCTCGACGCG ACATACGACC AGGTCGACTA CATCTCCCTC
CACATGTATT TCGAGAACTA CGAGAAGAGA ACTTCAGAAT TTCTCGCTCT TCCGGAAAAG
CTCGATCGCT ACATCGGCAC GGTCAGTGGT GTTATCGATT TTGTGAAGGG CAGCAAACGG
TCCAATCGAG ACGTCAAGAT TTCCTTCGAC GAATGGAACG TCTGGTATCA CGAGCGCAAG
AACGACGCCA AGCGGATGCG AGAATGGAAT TGGCCTCATG CGCCGGTTCT CCTCGAAGAC
ATATATAACT TCGAGGATGT GCTCCAGGTC GGGTGCATCA TCAACACCTT CATCCGCCGC
TCGGACGTCG TGCGAGTCGC CTGTATAGCG CAGCTGGTCA ACGTGATCGC GCCGATCATG
ACCGAGCCAG GCGGTAGTTC CTGGCGTCAG ACGATCTACC ATCCCCTCCA TCTGGCATCT
CGCTACGGTC GAGGCACCGC GCTGCAACTC GACGTCGACT GTGCGACTTA TGTCTCCAAC
GTTTCCGAAG CTGTGTCCTA TCTCGATATC GCCGGCGTTC ATGACGCCGA CGCGGGCACT
CTCACCTTCT TTGCGGTCAA TCGCCACTCG TCCGAAGCGG CAAGCATCAA GCTCGCCGTG
GAGCGTTTCG GAACCATCAG GGGCGTCGAG CACACCCTGA TCAAGCACGA CGATCTCGAG
GCCCGGAATA CCAAGGACAA TCCGGACAAC GTCTCACCGC GCAAGACGTC CGATGCGGTC
ATGGACGGAA ACAGCGTCAG TGTTTCCGTT CCGCCATACT CGTATTCGAT GATCAGAATT
CGACTTTAA
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| Protein sequence | MEARVTAHSR YTIADIDKRL YGSFLEHLGR AVYTGIYEPG HPTALPNGMR KDVIDLVREL
DTPICRYPGG NFVSAYNWED GIGPKEGRPT RLDLAWRTSE SNQVGIHEFA EWAEAAGTEM
MLAVNLGSRG LDAARNFVEY VNHPGGSQWS DLRRQNGRAE PWNVKLWCLG NEMDGPWQVG
HKSAAEYGHL ANETAKAIRA FDDKLELVVC GSSHSDMATY PRWEATVLDA TYDQVDYISL
HMYFENYEKR TSEFLALPEK LDRYIGTVSG VIDFVKGSKR SNRDVKISFD EWNVWYHERK
NDAKRMREWN WPHAPVLLED IYNFEDVLQV GCIINTFIRR SDVVRVACIA QLVNVIAPIM
TEPGGSSWRQ TIYHPLHLAS RYGRGTALQL DVDCATYVSN VSEAVSYLDI AGVHDADAGT
LTFFAVNRHS SEAASIKLAV ERFGTIRGVE HTLIKHDDLE ARNTKDNPDN VSPRKTSDAV
MDGNSVSVSV PPYSYSMIRI RL
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