| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5581 |
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| Symbol | |
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| ID | 5319883 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 547820 |
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| End bp | 548707 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640777328 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001314260 |
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| Protein GI | 150377665 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.613698 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.150229 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCTCA GAAACCGGCG CAACGAAGGT CTCTTCGGCT TGGCGCTCGT CGCGCCTTTC
GTCGCCATTT ACGGACTTGT GTTCGTCTAT CCGACGATCA AGCTTTTCAT GACAAGCTTC
ACAGATGCGC CCCTGATTGG CGATGGAAAC TTCGTCGGGT TCGACAACTA CGCACGCCTT
CCTTCTGACC GACGGTTCGG CACCGCGGTG TGGAACACGG CCTACTTCGT ACTCATCACC
GTCGTCCCTG GAACGCTTTT GGCATTCGCA ATAGCGCTCG GCGTCAATCG TCTTGCCGGA
CGGCTTCAGG CGGCCGTGCT CGCTCTATTC TTCTTGCCAT ATATTCTTCC GGTTTCGGTC
GTATATCTCC TCTGGGATTG GACGCTGAAC TTCCAGTTCG GCATCGCGAT GTACCTTTTC
GACATGCTCG GCATCGCGCG CATCCCCGTT TTCAAGTCGA CCGCCTGGTT CATGCCCGCC
GTGGGTATGA TCACAATCTG GTGGACCGCC GGATTTTCCA TATTGTTGTT CCTCGCCGGG
TTGCGAACCA TCCCGACGGA AATCTACGAG GCTGCGGCCT TGGACAACGC CGGCAGATGG
TCGACCTTCC GCCGGATCAC TTGGCCTTTG ATGTGGCCAA TCACAGCGCT CGTATTGACC
ATCCAGTTGA TTTCACAGCT CAAGATTTTT GACCAAGTCT ACCTGTTCTC AGTCGGCGGA
CGACCGAACG ACAATATGGT CCTGGTCTAT TATGTCTTTC AGCGAGCGTT CCAGTCGGAT
CAGGGAGGCA GGGCAGCAGC CGTCGCGGTG GTTCTCTTTG TAATCGTCAT CGTCGTGTCG
GTTTTGAATT TTCAGCTTAC ACGCCTTTCG GGAGGGCGGG ACCGATGA
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| Protein sequence | MMLRNRRNEG LFGLALVAPF VAIYGLVFVY PTIKLFMTSF TDAPLIGDGN FVGFDNYARL
PSDRRFGTAV WNTAYFVLIT VVPGTLLAFA IALGVNRLAG RLQAAVLALF FLPYILPVSV
VYLLWDWTLN FQFGIAMYLF DMLGIARIPV FKSTAWFMPA VGMITIWWTA GFSILLFLAG
LRTIPTEIYE AAALDNAGRW STFRRITWPL MWPITALVLT IQLISQLKIF DQVYLFSVGG
RPNDNMVLVY YVFQRAFQSD QGGRAAAVAV VLFVIVIVVS VLNFQLTRLS GGRDR
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