| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5580 |
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| Symbol | |
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| ID | 5319882 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 546981 |
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| End bp | 547823 |
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| Gene Length | 843 bp |
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| Protein Length | 280 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640777327 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001314259 |
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| Protein GI | 150377664 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0395] ABC-type sugar transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.14397 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCGA CAACAGCGCG CCGACTTAAC GCCATCGGCC TCATTATCAC TGTCATAACC
GTCTTCTGCG CCATCATCTG GGCGTTTCCC CTTTACTGGG CTGTGGTTTC GTCACTGAAG
CCTGAGCACG AAGTCGTCAG GCCCTATATC GAGCTCTGGC CCGAAACTTT CACCGTATCG
CACTATGTAT TCGCCCTGAC GCAGACAGAG ATCGGGCGGT GGTATGTCAA TTCCATCGTC
ACGGCGACAG CCGTCACGGT GCTGACTGTC AGTTCGTCAC TGTTTTGCGG CTACGCCATC
TCGCAGCTGA ACTTTCCGCT TCGGAATGTC TTGTGGTGGC TAATCTTGGC GAGCTTCATG
ATCCCCATGC AGACCCTGAT CGTCAACCAC TTCGAATTGG TGGCCGATCT TGGCCTGATC
AATACCTGGA GTGGGATCGT GCTCCCGCAG CTCATTCATC CCGTCATCAT CATCGTCTAC
AAGCAATTCT TTGACGGCGT GCCGAAGGAT TTTCGCGAGG CCGCGGTTAT GGACAATGCG
TCTGAATGGC GGATTTTAAC CAAGGTCTAT ATTCCAATGA ACTGGGGTGT GACAACGGCG
CTCTCGATCG TCTGCTTCAT CTGGTCCTGG AACGCGTTCT TGTGGCCATT TCTTGCGGTG
ACCAAGACCG ACATGATGAC GATTACTGTG GGGATCACGC AGGTGAACGA TGCCTTCGGG
GTCTATTATG CAAGGCAGCT TACTGCGGCG GTTCTCGCCG GCCTGCCGGT GGCCATGGCT
TACCTAATCT TTCAGCGGCG CGTCACTGAA GCGATCACAC TGTCAGCGGG TATTAAAGGC
TAG
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| Protein sequence | MTATTARRLN AIGLIITVIT VFCAIIWAFP LYWAVVSSLK PEHEVVRPYI ELWPETFTVS
HYVFALTQTE IGRWYVNSIV TATAVTVLTV SSSLFCGYAI SQLNFPLRNV LWWLILASFM
IPMQTLIVNH FELVADLGLI NTWSGIVLPQ LIHPVIIIVY KQFFDGVPKD FREAAVMDNA
SEWRILTKVY IPMNWGVTTA LSIVCFIWSW NAFLWPFLAV TKTDMMTITV GITQVNDAFG
VYYARQLTAA VLAGLPVAMA YLIFQRRVTE AITLSAGIKG
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