| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5576 |
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| Symbol | |
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| ID | 5319878 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 541185 |
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| End bp | 542774 |
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| Gene Length | 1590 bp |
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| Protein Length | 529 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640777323 |
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| Product | histidine kinase |
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| Protein accession | YP_001314255 |
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| Protein GI | 150377660 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.44664 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0252292 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTAAGTG AAGCCGCGGT GCCCTCGATT TCAATTCCCG ATTTAGAGAC CTTAGCAACA
TCAATCCATG ACGATACAGC CTTCGTCGTC TTGACTGAGG AGGTGTTGCG GGGACGGGAT
ATCGGGAGGA TCTCGACATT GCTGGCAAAT CAGCCGAGCT GGTCGGACCT CCCCTTTATC
ATCCTCACTT CGCGTGGGGG GCCGGATCGC CATTCCAGTG CCCGACTTTC AGAATCACTC
GGCAACGTCA CTTTTCTCGA GCGGCCTTTC CACCCCACAA CATTCATTAG CGTCGCTCGC
TCGGCTATGA AGGGACGGCG TAGGCAGTTT GAAGCGCGTA CCAGGCTTGA GGAGATCAGT
CGCCTCAATG AGACGCTTGA GGAGCGCGTG GCGATACGCA CTGCAGAATT GCAGCGCGCG
AACAGAGTTC TCTCTGAGCA GATTGCACAG CGCGAAGATG CCGAAGAGAG ACTGCGGCAA
TCTCAAAAAC TTGAAGCCAT CGGCCAGTTG ACTGGCGGCG TTGCCCACGA CTTCAACAAT
CTCCTCATGG CAGTGCTCGG CAATCTTGGC CTGCTATCTA AATATGTCTC TCACGACCCG
AATGCAGCCC GTCTCCTTGA AGGGGCGACG AGAGGGGCGC AAAGAGGGGC GGCACTTACC
CAGAGGCTAC TCGCATTTGG ACGCCGACAG GACCTGACTG TTAGACCCAC AGATATGGTG
GGTCTCATCA TTGGTATGGA TGATCTTTTG ATCCGATCAA TAGGCCAGAA TATTGAGCTC
GAGAAGCACC TGCCACGGCA GTTACCCAGG GCGCTGATAG ATGCCAACCA AGTCGAACTG
GCGCTGCTTA ACCTTGCGAT CAACGCGAGA GATGCAATGC CAAGCGGCGG AAAGCTGGTG
CTCTCTGTGA GGCAGGAACG TCTCTCTGCC ACGCGAGGCG AGTTGTGTGC ACGCGAATAT
CTTGTCCTTT CGGTTTCGGA CACGGGCCAT GGCATGGACG CGGCAACCCT CAAGAGAGCT
ATAGATCCGT TTTTCTCAAC CAAGGGGCCG GGTAAAGGCA CGGGGCTCGG ACTCTCAATG
ATCCACGGTG TTGCGGTCCA AATGAACGGC GCGCTGGAAC TTACTAGCGT ACTCAACGAA
GGTACGACCG CTGAGTTGTG GTTTCCGGCG ACTTCAGAGG CCACGCTTGA CGAACCGGTC
AAACCGCCGG TCGCATCATC CGAAACCGCA AAGTTGCTAC GAGTTTTGTT GGTAGACGAC
GACGCACTTA TCGCGATGAG TTCAGTCGAT ATGCTGGTGG ACTTGGGACA TACTGTAACT
GAAGCCAATT CGGGCAAAGC GGCTTTGGCG CTGCTTGAGG CGGGTAACGA GTTCGATCTT
ATGATCACCG ATTACTCGAT GCCTGGAATG AATGGTGCCG AACTCGCTCG CGCCGCACTA
CTGCTTGCAC CGAAAATGCA AATTCTTGTC GCATCTGGGT ATGCGGAACT TCCATCAGGC
GCGGGTATCG ATCTTCCCAA GCTTGGAAAA CCATATAGTC AGTCGCAACT TGCGGATGAG
ATAAGCAAGT TGTTCGCCGG GGATGAGTAA
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| Protein sequence | MLSEAAVPSI SIPDLETLAT SIHDDTAFVV LTEEVLRGRD IGRISTLLAN QPSWSDLPFI
ILTSRGGPDR HSSARLSESL GNVTFLERPF HPTTFISVAR SAMKGRRRQF EARTRLEEIS
RLNETLEERV AIRTAELQRA NRVLSEQIAQ REDAEERLRQ SQKLEAIGQL TGGVAHDFNN
LLMAVLGNLG LLSKYVSHDP NAARLLEGAT RGAQRGAALT QRLLAFGRRQ DLTVRPTDMV
GLIIGMDDLL IRSIGQNIEL EKHLPRQLPR ALIDANQVEL ALLNLAINAR DAMPSGGKLV
LSVRQERLSA TRGELCAREY LVLSVSDTGH GMDAATLKRA IDPFFSTKGP GKGTGLGLSM
IHGVAVQMNG ALELTSVLNE GTTAELWFPA TSEATLDEPV KPPVASSETA KLLRVLLVDD
DALIAMSSVD MLVDLGHTVT EANSGKAALA LLEAGNEFDL MITDYSMPGM NGAELARAAL
LLAPKMQILV ASGYAELPSG AGIDLPKLGK PYSQSQLADE ISKLFAGDE
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