| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5571 |
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| Symbol | |
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| ID | 5319873 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 537229 |
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| End bp | 538455 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640777319 |
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| Product | OsmC family protein |
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| Protein accession | YP_001314251 |
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| Protein GI | 150377656 |
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| COG category | [E] Amino acid transport and metabolism
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases
[COG1765] Predicted redox protein, regulator of disulfide bond formation |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0439292 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATTCA AAACGCAACG GCTCCAATTT TCCGGTCATT CAGGCGCGAC GCTCAGCGCC
CGCCTTGATC TGCCAAATGG GCCTTTGCGC GCCTACGCGC TTTTTGCCCA TTGCTTCACC
TGTTCCAAGG ATCTGGCGGC AGCACGCCGG ATTGCAGTGG AGCTTGCGCG TGAAGGCATC
GCTGTCCTGC GTTTTGATTT CACGGGGCTG GGATCGAGCG AAGGCGAATT CGCTTCAACG
AATTTCTCCT CCAACGTTGC CGACCTTCTT TCAGCCGCGG ACTATTTACG CCAACACTAT
GAGGCGCCAG CGGTGCTGAT CGGCCACTCG CTCGGTGGTG CAGCGGTCCT CACCGTCGCC
GGGGACATTC CGGAAGTGCG CGCCGTAGCC ACCATAGGCG CGCCGGCTGA TGTCGGCCAC
GTATTGAAGA ACTTCGGAGC GAGCCTCGAC GAGATCGAGA AGAACGGCGA GGCCGACGTC
GATCTCGCCG GGCGCACGTT TCTCGTCAAA AGACAGTTTG TCGAGGACAC GCGTGCACAC
CGCATCAAGG ATGCTGTTGC GGGGCTGAAA AGACCGCTCC TCGTCCTTCA CGCGCCGCTG
GACCATACGG TCGGGATCGA GAACGCCACC GAGATCTTCG TCGCGGCGAG GCATCCGAAA
AGCTTCATTT CGCTGGACAA GGCTGACCAC CTGCTCACCG ACCGTGAGGA TGCGGCCTTT
GCCGGACGGA TCATTTCGGA ATGGCTGACA CGCTATCTTG CCGCCGACAC GCCGCAAGCC
ACCGGGCCGA TCGAATATGT CCGCGTGAGG GAAACGGGCG AAGGAAAGTT TCAGAACGCT
GTTCAGGCTG GCGGGCATCG GCTGTTCGCC GATGAACCCG AAAGCGTGGG CGGGCTTGAT
TCCGGACCAT CGCCCTACGA CTTCCTGGCG GTCGCACTTG GCGCCTGCAC CTCGATGACG
CTGCGCCTCT ATGCCGGCCA CAAGCAGCTG AAGCTCGGAC GCATCGCCGT CGACGTCTCG
CATGCCAAGA CTCATGCGAA GGATTGCGAG GAGTGCACCG AGCTGGAACG CAGTGGCAGC
GGCAGGATCG ATCGTTTCGA GCGCGTCATT TCCATCGATG GCGAGGTCTC GGAGGAGCTT
CGCGAGAAGA TCGGCGAAAT CGCCGGCAAG TGCCCGGTCC ATCGCACGCT CGAAGCAGTG
ACGAAGATAA AAACGGTCGT GAAGTAA
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| Protein sequence | MAFKTQRLQF SGHSGATLSA RLDLPNGPLR AYALFAHCFT CSKDLAAARR IAVELAREGI
AVLRFDFTGL GSSEGEFAST NFSSNVADLL SAADYLRQHY EAPAVLIGHS LGGAAVLTVA
GDIPEVRAVA TIGAPADVGH VLKNFGASLD EIEKNGEADV DLAGRTFLVK RQFVEDTRAH
RIKDAVAGLK RPLLVLHAPL DHTVGIENAT EIFVAARHPK SFISLDKADH LLTDREDAAF
AGRIISEWLT RYLAADTPQA TGPIEYVRVR ETGEGKFQNA VQAGGHRLFA DEPESVGGLD
SGPSPYDFLA VALGACTSMT LRLYAGHKQL KLGRIAVDVS HAKTHAKDCE ECTELERSGS
GRIDRFERVI SIDGEVSEEL REKIGEIAGK CPVHRTLEAV TKIKTVVK
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