Gene Smed_5564 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_5564 
Symbol 
ID5319866 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp532088 
End bp532513 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content61% 
IMG OID640777313 
Producthypothetical protein 
Protein accessionYP_001314245 
Protein GI150377650 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0877464 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACGA TCCTGCTCGC CGCGGGCACA CCCATCTACG CGCAAACGCC GCAACATGCA 
GCCACACAAT TCCTGCCGAT CAAGAACGAG CCTGCACCCA AGCTCTTCGT GGATCAGCCC
CTTCCGAGAC CGCTGATTAC GAGAGGCGTG GCCATCATTC CCTATCGGGC CGAGAACTTC
CGCATCCTGC CCATCTTTGG CGCTGGCGCC ACCGATATCT CACCGCGAGC TGGGCACCTC
CATGTCAGCA TCGACGATCT GCCGTGGCGG CGGGCCGATG CAGGCGGCAC TGGCGCGATC
GTCCTGACCG GGCTGCCGCC AGGCGAACAC AAAGTGCTCA TCGAAATCGC CACGCCAGAA
CATCAAGTGC TAGGCGGAAA GGTTGTGAAA TTCACCGTAC CCGCGATCGA CAGCTCACAC
CTTTAG
 
Protein sequence
MTTILLAAGT PIYAQTPQHA ATQFLPIKNE PAPKLFVDQP LPRPLITRGV AIIPYRAENF 
RILPIFGAGA TDISPRAGHL HVSIDDLPWR RADAGGTGAI VLTGLPPGEH KVLIEIATPE
HQVLGGKVVK FTVPAIDSSH L