Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_5562 |
Symbol | |
ID | 5319864 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009621 |
Strand | + |
Start bp | 530036 |
End bp | 531250 |
Gene Length | 1215 bp |
Protein Length | 404 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640777311 |
Product | hydroxypyruvate reductase |
Protein accession | YP_001314243 |
Protein GI | 150377648 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2379] Putative glycerate kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.912561 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.104542 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCAGGCCG CGGATCCGAT CAATAGGATC AAGGATCTCC TGCCGACTCC GCCTTTGAGC GGGCGCGTGG TCGTTGTCGG TGCCGGAAAG GGTGCGGCCC AAATGGCGCG TTCACTGGAG GAACTTTGGG ATGGTCCACT GAGCGGTGTC GTGGTGACAC CCTATGGCTA CGAATGCAAC ACTAAGCGGA TCGACGTGAT ATCGGCAGCC CATCCGGTCC CAGACAGGGC CGGCTTGGAG GCGGCCCAGC GGCTGAAAGC CACTGTGGCG AATCTGTCCA GCGAGGATCT AGTGCTGGCA TTGATCTGTG GCGGGGGCTC GGCTCTTCTG CCAGCACCGC CACCAGGATT CTCGCTTGTA GACGAGATTG CCCTAAACGA GGAATTGTTG GCGTCGGGGG CTCCAATCTC AGCGATGAAC CTCGTGCGCA AGCATTTTTC CACTATCAAG GGTGGAAGGC TTGCGGCGCT GACGAAAGCG CGAGTTGTTA GTTTCGTGGT ATCCGACATC CCCGGAGACG ACGCGGCGCT GGTGTCTTCC GGCCCGACGA TTCCCAGCTT AGGTATCCGT CGTGATGCTT TGGAGATCAT CGACCGGTAC CGACTGAAGC TTCCGCGACG AATGCTTGAT TTTATTGGCA CTGATGTTGC CGATGCACCC CAGCCAGCGG ACGCGACCTT CGCTTCCCAT AGCCATCACC TCGTTTCCTC TGCCCGAATT TCGCTCGAAG CGGCGGCTGA GTTCGCGCGT GCATCCGGCG TCAGACCAGT GGTTTTGTCT GATTGCCTTG AAGGGGAGGC GCGAGATGTT GGACGCGTAC ATGCGGCTAT CGCGCGTGAA ATTGCTTTGT ACGACAGCCC GTTCACCAAA CCTTGTGTTT TGCTGTCTGG CGGCGAGACA ACCGTGACCT TGTCATCACG TGGCGGCAAA GGCGGACGCA ACGGAGAATT TGTTCTGTCT CTCGCGCTCG CCATCGATGG TCTCGATGTG TTCGCGCTCT CCGCTGATAC CGATGGTATA GACGGCTCAG GTAACAATGC AGGAGCGTTT GCAGACGGGC GCAGCGTCAG GCGCTTCGTC GCCCATGGCA TCAATGGTGA CGCAGCACTG GCAGCAAACA ATAGCTATTC CGCCTTTTCT GCCGTCGGGG ACCTGTTCGT GGTCGGACCT ACCGGTGTCA ACGTCAACGA TTTCCGTTCA ATCCTGGTGC GTTAG
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Protein sequence | MQAADPINRI KDLLPTPPLS GRVVVVGAGK GAAQMARSLE ELWDGPLSGV VVTPYGYECN TKRIDVISAA HPVPDRAGLE AAQRLKATVA NLSSEDLVLA LICGGGSALL PAPPPGFSLV DEIALNEELL ASGAPISAMN LVRKHFSTIK GGRLAALTKA RVVSFVVSDI PGDDAALVSS GPTIPSLGIR RDALEIIDRY RLKLPRRMLD FIGTDVADAP QPADATFASH SHHLVSSARI SLEAAAEFAR ASGVRPVVLS DCLEGEARDV GRVHAAIARE IALYDSPFTK PCVLLSGGET TVTLSSRGGK GGRNGEFVLS LALAIDGLDV FALSADTDGI DGSGNNAGAF ADGRSVRRFV AHGINGDAAL AANNSYSAFS AVGDLFVVGP TGVNVNDFRS ILVR
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