| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5560 |
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| Symbol | |
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| ID | 5319862 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | + |
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| Start bp | 528309 |
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| End bp | 529094 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640777309 |
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| Product | hydroxypyruvate isomerase |
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| Protein accession | YP_001314241 |
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| Protein GI | 150377646 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3622] Hydroxypyruvate isomerase |
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| TIGRFAM ID | [TIGR03234] hydroxypyruvate isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.446227 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0996892 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGAAGT TCGCAGCCAA TCTCTCTATG CTCTATACGG AGCATTCATT TATCGAGCGG
TTTGCCGCCG CCTCTGCCGA TGGCTTCAAG GCAGTCGAAT ATGTCAGCCC CTATGAGGAG
ACGCCGGATG CCATCGCAGC CGAACTGAGG CGGAACGGAC TAACCCAGGC CCTGTTCAAT
CTTCCAGCCG GCGACTGGTC GGCAGGCGAA CGCGGCATCG CTTGCCTGCC TGATAGAGTC
GAGGAATTCG AGGCATCCGT CGACACGGCG ATCGCCTACG CCCAGGCGCT CGACTGCTGC
AAGATCAATT GCCTTGCAGG AATCGCGCCC GCTGGCATGG AGCCGGACGT GGCCGAGGCG
ACGCTCGCCG ACAATCTCAG ATATGCCGCA GAGCGACTGG CCGCTGCCGG GATATCGCTG
GTCTTCGAAC CGATCAACAC CCGCGACATT CCCGGTTACT TTGTAGCAAC GACTGATCAC
GCCGAGCGGA TAATGGACCG GGTCGACCAC CACAATCTGC TGATCCAGTA TGATTTCTAT
CATATGCAGA TCATGCAGGG CGATCTCCTC TCCACCTTCG AGAGACTGCA AAGGAGGATC
GGCCATGTCC AGATCGCTGA CAATCCCGGC CGCCACGAGC CGGGCACCGG CGAGATCAAC
CACGGTTTCA TTTTTAAGCG GCTCGACGAG CTCGGCTACG AGGGCTGGGT GGGTTGTGAA
TACAAGCCTG CAGTCGGCAC GCGCGCGGGT CTCGATTGGC TTAAGATGTT ACAGCAAGGG
AATTAA
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| Protein sequence | MPKFAANLSM LYTEHSFIER FAAASADGFK AVEYVSPYEE TPDAIAAELR RNGLTQALFN
LPAGDWSAGE RGIACLPDRV EEFEASVDTA IAYAQALDCC KINCLAGIAP AGMEPDVAEA
TLADNLRYAA ERLAAAGISL VFEPINTRDI PGYFVATTDH AERIMDRVDH HNLLIQYDFY
HMQIMQGDLL STFERLQRRI GHVQIADNPG RHEPGTGEIN HGFIFKRLDE LGYEGWVGCE
YKPAVGTRAG LDWLKMLQQG N
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