| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5559 |
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| Symbol | |
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| ID | 5319861 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | + |
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| Start bp | 526584 |
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| End bp | 528296 |
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| Gene Length | 1713 bp |
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| Protein Length | 570 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640777308 |
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| Product | ABC transporter related |
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| Protein accession | YP_001314240 |
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| Protein GI | 150377645 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
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| TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.153225 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0799333 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAAAGC CCGACACGCT GCTCTCGGTG CGCAATCTCT CGATTGATTT CCACCTGCGC
ACGCACGTGC TCCACGCGGT GCGCAACGTC AGCTTCGACC TGAAGCGCGG CCAGACCATG
GCTCTCGTGG GCGAAAGCGG CTCGGGAAAA TCGGTGACCG CGCGCGCCTT GATGCGGATC
ATTGATAAGC CCGGCCGAAT GATCGGCGGC CAGATCCTGC TCGACGGCCC GAATGGCCCT
GTGGATGTGG CACGCTTCAA GGAAGGCAGC CGCGAGGTGC TCGCCATCCG TGGTGGGCGG
ATCGGGTTGA TCTTCCAGGA GCCAATGAGT TCCCTGTCGC CGGTCCACAC TATCGGATCG
CAGATCGTCG AAGCGGTGCG CCTGCATCGG CGGGTGTCCA AGTCGGAGGC GCGCGCCCGC
TGTGTCGAAC TGCTGCGTCA GGTCGAGATC CCGCAACCAG AGCTGATGGC CGACCGGTAT
ACCTTCGAGT TTTCCGGCGG CATGCGGCAA AGGGCGATGA TTGCGATGGC GCTCGCCTGC
GATCCGCAGG TGCTTATTGC CGACGAGCCG ACGACGGCGC TCGACGTGAC CACTCAGGCA
GAAATCCTCG ACCTCATCAA GCGGCTGCAG GACGCACGCG GCATGGCAAT GCTGCTTATC
ACCCACGACA TGGGCATCGT CGCCGAAGTC GCGGATGACG TTGCCGTCAT GCGCTTCGGC
AAGATCGTTG AACAGGGGCC GGTTGACGAC ATATTCCACG CCAGCCAGCA CCCGTATACG
CGCCAGCTTC TCGACGCGAC GGTCAAGCTC GAAAGCGGCG CGGCGATCCG TGCTTTGCCG
GCATCGCTGA CACCGTCCGT CGAGCCAGTG CTTTCTGTTC GCAATCTCAC CAAGATCTAC
GGCGCACCCT CGCGCATGTT CGCGCGCAGC GGCGGCCGCG GACTGGTGGC TGTCGATGAT
GCCAGCCTCG ACCTCTTCCC GGGCGAGAAC CTTGGCATCG TCGGCGAAAG CGGCTCCGGC
AAAACGACGC TTGGACGCAT GATCCTGCGC ATTGTCGAGC CGACGTCCGG GACCGTGACG
TATCGTGCCG ATGCGACGTC TGCACCTGTC GACGTCACCG CGCTCGGCAA GGTAGATCTG
CGGCGCTACC ATCAGGATGT ACGGCTGATC TTTCAGGATC CCTTCGCGTC GCTCAATCCA
CGCATGACCG TGAAACAGAT CATCGGCGAT CCGCTCGTCA TCTCCAAGGG CATGTCCGGC
AAGGCCGTGG AGGTACGGGT TGCCGAACTT ATGGGCAAAG TGGGTCTGGA CCCGCTCGCC
ATGGAGCGCT ACCCGCACGC ATTTTCGGGC GGTCAGCGCC AGCGCATCGG CATCGCCCGG
GCGCTTGCCC TCAATCCCAC GGTCATCGTT GCGGACGAAG CGACATCCGC TCTCGATGTC
TCGATCCGCA GCCAGATTCT CGATCTTATG ATCGACATCC AGAAGCAGTT GCATCTCAGC
TTCATCTTCA TCTCCCACGA CATCTCGGTC GTGCGCTATT TCTGCGATCG CGTCGCCGTC
ATGCACCGGG GCAAGATCGT TGAAGTCGGT GATGCCGAAA CTATCTGCAC CAACCCTTCG
CAGCCCTACA CGAGGCGGCT GATTTCCTCT GTTCCAAACC CGGATCCCCG CAACAAGCGC
ATGCTTCACC GCCTGCGCAC AGATCAAGTC TAA
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| Protein sequence | MTKPDTLLSV RNLSIDFHLR THVLHAVRNV SFDLKRGQTM ALVGESGSGK SVTARALMRI
IDKPGRMIGG QILLDGPNGP VDVARFKEGS REVLAIRGGR IGLIFQEPMS SLSPVHTIGS
QIVEAVRLHR RVSKSEARAR CVELLRQVEI PQPELMADRY TFEFSGGMRQ RAMIAMALAC
DPQVLIADEP TTALDVTTQA EILDLIKRLQ DARGMAMLLI THDMGIVAEV ADDVAVMRFG
KIVEQGPVDD IFHASQHPYT RQLLDATVKL ESGAAIRALP ASLTPSVEPV LSVRNLTKIY
GAPSRMFARS GGRGLVAVDD ASLDLFPGEN LGIVGESGSG KTTLGRMILR IVEPTSGTVT
YRADATSAPV DVTALGKVDL RRYHQDVRLI FQDPFASLNP RMTVKQIIGD PLVISKGMSG
KAVEVRVAEL MGKVGLDPLA MERYPHAFSG GQRQRIGIAR ALALNPTVIV ADEATSALDV
SIRSQILDLM IDIQKQLHLS FIFISHDISV VRYFCDRVAV MHRGKIVEVG DAETICTNPS
QPYTRRLISS VPNPDPRNKR MLHRLRTDQV
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