| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5538 |
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| Symbol | |
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| ID | 5319840 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | + |
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| Start bp | 502456 |
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| End bp | 503550 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640777289 |
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| Product | 2-nitropropane dioxygenase NPD |
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| Protein accession | YP_001314221 |
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| Protein GI | 150377626 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.485511 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0535988 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAACGT GGCATGACCG CCGAATCCTC GACCTTCTGG GAGTGGAGAT TCCCGTCATT
CAGGCGCCGA TGGCCGGAGC GACGACGGCA GAAATGGTGA TTGCCGCTTC TGAAGCTGGC
GGCTTGGGTT CGTTGCCGAG CGCGCAATAT TCGGTCCACC AATTGCACGA GGCGCTCTCG
CAGATTACTG CGAGAACAAC CAGGTCAATC AATGTAAATT TCTTCAGCCA CGTGAAACCT
GATGCTGATC CTGCTGGTCA GATGAGGTGG CGGGCACTCT TGGCGCCGTA TTTCGTCGAA
CTTGGCCTTG ACCCCGCTGC CCCGATCAGC GGCCCCGGAC GTGCGCCCTT CGACAACGAG
TTCTGCGAGG TCGTCGAAGA GTTCCGCCCC AAGGTGGTGA GCTTCCATTT CGGTCTTCCC
GATCGAAGAC TCGTTGATAG GGTAAAGGCC GCGGGGGCCA AAGTGCTGTC GTCCGCGACG
ACCGTCGCCG AGGCCGTCTG GCTCGAGGCA CATGGTGTTG ATGCCGTGAT CGCAATGGGT
TTCGAGGCTG GCGGGCATCG CGGAAACTTT CTTACGCAGG ACATGACAAC CCAAGTGGGA
ACGATGGCGC TCATTCCGCA GGTCGTGGAC GCGGTTAAGG TTCCGGTCAT TGCTGTCGGG
GGTATCGCAG ATGGCCGCGG AGTTGCGGCG GCGTTGATGC TTGGAGCGTC AGCGGTGCAG
ATCGGTTCTG CTTACCTTCT AACTCCAGAG GCCAAAATTC CGGATCTGCA CGCCGATGCT
CTGGGTCGTG CCGGCGACGC CAGTACCGCC ATCACCAATG TCTTTACAGG AAGGCCCGCG
AGAGGCGTCG TAAACCGACT GATGCGAGAA CTAGGTCCGC TTTCGGACGT GGCGCCCGCC
TTTCCGACCG CCGGAGTGGC GCTCGCCGCG ATCCGCGCGA GGGCGGAGGA GGAGGGACGC
GATGACTTCA CCAACCTCTG GGCGGGGCAG GCCCTTGGTT TGGCGAGGCG GCTTCCCTCA
GCGGAACTCA CCGTGAAGTT GTTCGAGGAC GCGATGGCAG CCCTGGGGGC GGGTTCGGCG
ATCAGGCGAC TGTAG
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| Protein sequence | MRTWHDRRIL DLLGVEIPVI QAPMAGATTA EMVIAASEAG GLGSLPSAQY SVHQLHEALS
QITARTTRSI NVNFFSHVKP DADPAGQMRW RALLAPYFVE LGLDPAAPIS GPGRAPFDNE
FCEVVEEFRP KVVSFHFGLP DRRLVDRVKA AGAKVLSSAT TVAEAVWLEA HGVDAVIAMG
FEAGGHRGNF LTQDMTTQVG TMALIPQVVD AVKVPVIAVG GIADGRGVAA ALMLGASAVQ
IGSAYLLTPE AKIPDLHADA LGRAGDASTA ITNVFTGRPA RGVVNRLMRE LGPLSDVAPA
FPTAGVALAA IRARAEEEGR DDFTNLWAGQ ALGLARRLPS AELTVKLFED AMAALGAGSA
IRRL
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