Gene Smed_5533 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_5533 
Symbol 
ID5319835 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp498212 
End bp498805 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content59% 
IMG OID640777284 
ProductNADPH-dependent FMN reductase 
Protein accessionYP_001314216 
Protein GI150377621 
COG category[R] General function prediction only 
COG ID[COG0431] Predicted flavoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.91742 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.126229 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAAAGA AGCCTAAAAT CGCCCTCATA ATCGGCTCCA CCCGTCCGAC ACGGTTCGCG 
GACAAGCCTG CCCAGTGGAT GCTGAAGCAG GCCAAGCAAC GCGGCGATAT CGATGTCGAA
GTCGTCGATC TGCGCGATCA TCCGCTGCCG TTCTTCGATG AAGTGGCGTC GAATGCATGG
GCGCCCAGCA AGAGCGCCGA TGCTACCCGG TGGCAGGAAA CCGTAGGGAG CTACGACGGG
TACATATTCG TCGTTTCCGA ATACAATCAT TCGATCACCG GGGTCCTGAA GAATGCGCTC
GACCAGGCTT ACATCGAGTG GGGCCGAAAG CCGTTCACTG CAATCGCGTA CGGAAGCATG
GGCGGTTCGC GCGCACTCGA ACATCTCCGC GGGATCGGTG TGGAGCTGCA GATGGTTTCG
ACCCATGCCG CCGTTCACAT CGGCGCCGGC GATTTCTTTG CTACTTCACC GCTCGGCGGC
AATAAGCCGA TCGAAGAAAT CGAGGCCAAC CTCTTGCCGT CGGCCAAGAC CGCGCTCGAC
GAGTTGGCCT GGTGGGCGAA GGCCACGATG GCTGCGAAGG CTTCGCAACA GTAA
 
Protein sequence
MSKKPKIALI IGSTRPTRFA DKPAQWMLKQ AKQRGDIDVE VVDLRDHPLP FFDEVASNAW 
APSKSADATR WQETVGSYDG YIFVVSEYNH SITGVLKNAL DQAYIEWGRK PFTAIAYGSM
GGSRALEHLR GIGVELQMVS THAAVHIGAG DFFATSPLGG NKPIEEIEAN LLPSAKTALD
ELAWWAKATM AAKASQQ