| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5532 |
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| Symbol | |
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| ID | 5319834 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | + |
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| Start bp | 497144 |
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| End bp | 498175 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640777283 |
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| Product | D-cysteine desulfhydrase |
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| Protein accession | YP_001314215 |
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| Protein GI | 150377620 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2515] 1-aminocyclopropane-1-carboxylate deaminase |
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| TIGRFAM ID | [TIGR01275] pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.1518 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGACCG ACCGAGATCC TTTGCAGAGC TTTCCCCGTG AGCGACTGAT GAAAGGTCCA
ACGCCGATCC AGCGCTTGGC GCGTCTCGAA GAAGTTCTGG GCGAACGGAG TAGGGGCGTA
TCGATCTGGG CCAAAAGAGA TGATCTCATG GAACTCGGCG GCGGCGGCAA CAAGCTCCGC
AAGCTTGAAT TCCTCCTCGG GCAGGCGAAA GCGGAGGGAT GTGACACCCT CGTCGTAACG
GGAGGAGTTC AATCCAACTT CGCACGATTG GCCGCCGCAG CGTGCGCCAG GTCGGGGCTC
GCCTGCGAGC TCGTTCTTGC TCAGATGGTA CCTCGGACGA CCGAAATTTA TCAGGACAAC
GGCAATGTGC TTCTCGACCG TCTGTTTGGC GCCAGCGTTC ATATACTGGA CCCGGATGAA
GATGCTGGCG CGTATGCGAG GCGTCGGGTC GATGAGATCG CCGAAACTCG CAGGAGAGCT
CTTCTGGCGC CTCTCGGCGG CTCAACGACA ATCGGTTGCC TCGGTTACGT GGATTGCGCT
TTCGAACTCG CCCGGCAATC GGCTGAAACG GGTGTTGCGT TCGAGCAGAT CATCATCCCC
AACGGCAGCG GCGGCATGCA TGCCGGGTTG GCTGCTGGCG TGGTCGTTGC GGGGTCTCAC
CCTTCTCGGA TCGCCGCATA CACCGTGCTC TCGCCTGCAG ACAAGTGTCT CCTCGCAACT
GCGGACAAGG TCAACGCGGT TCTTGAGCGA CTGGCCAGCG ACGCTCGCGT GACCGCGGAC
GATCTCCGGA TAAGCAGTGC TCAACTGGGC GAAGGATACG GCATGCCGAC TTCCGGCATG
ATCGACGCGG TCGAACTTCT CGCGAGATCA GAAGGGCTTC TCGTCGATCC GGTTTACGGC
GGCAAGGCCT TGGCAGGGTT GCTGTCCGAC GTTGAAAGTG GGGCAATCGC ACCGCAGTCT
AACGTGCTCT TCATCATGAC CGGAGGTTCG CCCGGACTTT ATGCATACGC CGACGTTCTC
ACTTCCAAGT AG
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| Protein sequence | MMTDRDPLQS FPRERLMKGP TPIQRLARLE EVLGERSRGV SIWAKRDDLM ELGGGGNKLR
KLEFLLGQAK AEGCDTLVVT GGVQSNFARL AAAACARSGL ACELVLAQMV PRTTEIYQDN
GNVLLDRLFG ASVHILDPDE DAGAYARRRV DEIAETRRRA LLAPLGGSTT IGCLGYVDCA
FELARQSAET GVAFEQIIIP NGSGGMHAGL AAGVVVAGSH PSRIAAYTVL SPADKCLLAT
ADKVNAVLER LASDARVTAD DLRISSAQLG EGYGMPTSGM IDAVELLARS EGLLVDPVYG
GKALAGLLSD VESGAIAPQS NVLFIMTGGS PGLYAYADVL TSK
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