Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_5529 |
Symbol | |
ID | 5319831 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009621 |
Strand | - |
Start bp | 493994 |
End bp | 494662 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640777280 |
Product | glyoxalase/bleomycin resistance protein/dioxygenase |
Protein accession | YP_001314212 |
Protein GI | 150377617 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.907506 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.263855 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCATTC AGGAAAGCAT CATGCCAACG ATCGACGCAG CGAGTGATCT CGACATGAAG CTCGAGGTAG TCGTCATTCC AGTCTCCGAC GTCGACCGCG CCAAGACCTT CTATACGGGG CTCGGTTGGC GGCTGGATGC GGACGTTTCC GGTAGCGACG GCTTCCGGGT GGTTCAGGTG ACGCCACCCG GATCGCCCTG CTCCGTCATC TTCGGATCCA GGATCACGTC CGCACAGCCT GGCTCGGCTC AGGGACTTCA CCTGATCGTA TCCGACATCG AGTTGGCGCA TGCGGCGCTT GCCTCCCGCG GCGCTGAAAT GAGCGGCGTC TTCCATGATG CTGGCGGTGT GTTTCACCGT CGCGAAACGG AAAACCGCCT CCCTGGCCCG CACCCGTCAC GTGCCAGCTA CGGTTCCTTT GCCTCATTCA GTGATCCGGA CGGGAACGGC TGGATATTCC AGGAAGTCAC GAACCGTCTT CCCGGCCGTA TAGACGCAAA GGGCGCGGTC TACGTCTCGT CCGCTGATCT CGCGAGCGCA CTTCGCCGTG CCGCCGCCGC TCATGGCGAA CATGAGAAGC GAACTGGCGG GAACCACGAC GAGAACTGGC CGGATTGGTA CTCGCAGTAC ATGATCGCAG AGCAGTCCGG CTCAGAGCTG CCGACCTGA
|
Protein sequence | MTIQESIMPT IDAASDLDMK LEVVVIPVSD VDRAKTFYTG LGWRLDADVS GSDGFRVVQV TPPGSPCSVI FGSRITSAQP GSAQGLHLIV SDIELAHAAL ASRGAEMSGV FHDAGGVFHR RETENRLPGP HPSRASYGSF ASFSDPDGNG WIFQEVTNRL PGRIDAKGAV YVSSADLASA LRRAAAAHGE HEKRTGGNHD ENWPDWYSQY MIAEQSGSEL PT
|
| |