Gene Smed_5529 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_5529 
Symbol 
ID5319831 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp493994 
End bp494662 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content62% 
IMG OID640777280 
Productglyoxalase/bleomycin resistance protein/dioxygenase 
Protein accessionYP_001314212 
Protein GI150377617 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.907506 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.263855 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATTC AGGAAAGCAT CATGCCAACG ATCGACGCAG CGAGTGATCT CGACATGAAG 
CTCGAGGTAG TCGTCATTCC AGTCTCCGAC GTCGACCGCG CCAAGACCTT CTATACGGGG
CTCGGTTGGC GGCTGGATGC GGACGTTTCC GGTAGCGACG GCTTCCGGGT GGTTCAGGTG
ACGCCACCCG GATCGCCCTG CTCCGTCATC TTCGGATCCA GGATCACGTC CGCACAGCCT
GGCTCGGCTC AGGGACTTCA CCTGATCGTA TCCGACATCG AGTTGGCGCA TGCGGCGCTT
GCCTCCCGCG GCGCTGAAAT GAGCGGCGTC TTCCATGATG CTGGCGGTGT GTTTCACCGT
CGCGAAACGG AAAACCGCCT CCCTGGCCCG CACCCGTCAC GTGCCAGCTA CGGTTCCTTT
GCCTCATTCA GTGATCCGGA CGGGAACGGC TGGATATTCC AGGAAGTCAC GAACCGTCTT
CCCGGCCGTA TAGACGCAAA GGGCGCGGTC TACGTCTCGT CCGCTGATCT CGCGAGCGCA
CTTCGCCGTG CCGCCGCCGC TCATGGCGAA CATGAGAAGC GAACTGGCGG GAACCACGAC
GAGAACTGGC CGGATTGGTA CTCGCAGTAC ATGATCGCAG AGCAGTCCGG CTCAGAGCTG
CCGACCTGA
 
Protein sequence
MTIQESIMPT IDAASDLDMK LEVVVIPVSD VDRAKTFYTG LGWRLDADVS GSDGFRVVQV 
TPPGSPCSVI FGSRITSAQP GSAQGLHLIV SDIELAHAAL ASRGAEMSGV FHDAGGVFHR
RETENRLPGP HPSRASYGSF ASFSDPDGNG WIFQEVTNRL PGRIDAKGAV YVSSADLASA
LRRAAAAHGE HEKRTGGNHD ENWPDWYSQY MIAEQSGSEL PT