| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5515 |
|---|
| Symbol | |
|---|
| ID | 5319817 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009621 |
|---|
| Strand | - |
|---|
| Start bp | 481888 |
|---|
| End bp | 482244 |
|---|
| Gene Length | 357 bp |
|---|
| Protein Length | 118 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640777269 |
|---|
| Product | IS66 Orf2 family protein |
|---|
| Protein accession | YP_001314201 |
|---|
| Protein GI | 150377606 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3436] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.202115 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATCGGAG TTTCGCCGAA TGCCGTGAAG ATCATGGTGG CGACGCAGCC TGTCGACTTC
CGGCGCGGCA TGAATGGCCT GGTGGCTTTG GTGGCATCAG CGCTTGCGGC CGATCCCTAT
TGTGGCGACG TGTTCGTGTT CCGGGCCAAG CGTCTCGATC GACTTCGCTG CATTTACTGG
GACGGATCAG GCATGATCCT GGTGACGAAA TGGCTGGAGG CGGGCAAGTT CGTTTGGCCA
CCGATCCGCG ATGGCGCGAT GCAGATGAGT AGCCAGGAGT TCTCGCTTTT GTTGGCCGGT
ATCGACTGGA CGCGGGTCAA ACGAAACGCG GTAAAGCGAC CGACGAAAGC AGGCTGA
|
|---|
| Protein sequence | MIGVSPNAVK IMVATQPVDF RRGMNGLVAL VASALAADPY CGDVFVFRAK RLDRLRCIYW
DGSGMILVTK WLEAGKFVWP PIRDGAMQMS SQEFSLLLAG IDWTRVKRNA VKRPTKAG
|
|---|
| |