| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5510 |
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| Symbol | |
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| ID | 5319812 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | + |
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| Start bp | 476541 |
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| End bp | 477299 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640777264 |
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| Product | putative fimbrial chaperone protein |
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| Protein accession | YP_001314196 |
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| Protein GI | 150377601 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTCCA TTCTGAAGAG CATCGGCGCA GCCGCTTTGT TCGTGCTTTG TACCCTCGCC
GCCAATGCCG CTTCGCTCAT GATTTCGCCA TCCTCCATCG AGCGTGTCGC ACCGGATAGG
GCAGCGGTTT TGCACCTCAG GAACCAGACG GACCGTCCAA TTAGCATAGA GGTGCGGGTC
TTCCGGTGGA GGCAAAAAGG CGGAGTAGGG AAACTGGAGC CGACCAGCGA CGTGGTCGCA
AGCCCGAAAT CAGCGCAGCT CTCGCCGCAC GGCAGCCGCG TTGTCAGCGT GGTTCGCGTC
AGCAAGGAAC CGCTGCGCTC TGAGGAGAAC TACCGAGTGG TGATCGACGA GGCTGATCCG
GCGCGGAACG CGCCAGACAC CGAAAGGCTT GCAATGCAGC ACGTTCTGCC AGTCCTTTTC
CGCACGTCGG CTGGGCCTGG GCCGCAGGTT GATTTGAGTC TAACGCGCTC CCGCGGCTGG
CTTGTGCTCG TCGTCGAAAA TAAGGGGGCG AGAAGGTTGA GACTGTCTGA TGTGATGCTG
ATGCAGGGCG GTGAAGTCAT CGCCCGTCGA GAAGGGTTTG TCGGTTATGT GCTGCCGGGC
CCGACGCGGC ACTGGCGAGT TGGCAGGGAC GACAGTTATT CTGGCGGCGT CGTGACGCTT
TCAGCGAATA GCAGCGGCGG CGCGATCGGC GAACAGCTTG GGTTAGCGGT CGCTAGGGCT
TTCGCGCAGG TTCCTGTCGG GCTATTGCGA AATGCATAG
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| Protein sequence | MTSILKSIGA AALFVLCTLA ANAASLMISP SSIERVAPDR AAVLHLRNQT DRPISIEVRV
FRWRQKGGVG KLEPTSDVVA SPKSAQLSPH GSRVVSVVRV SKEPLRSEEN YRVVIDEADP
ARNAPDTERL AMQHVLPVLF RTSAGPGPQV DLSLTRSRGW LVLVVENKGA RRLRLSDVML
MQGGEVIARR EGFVGYVLPG PTRHWRVGRD DSYSGGVVTL SANSSGGAIG EQLGLAVARA
FAQVPVGLLR NA
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