| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5508 |
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| Symbol | |
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| ID | 5319810 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 475024 |
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| End bp | 475500 |
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| Gene Length | 477 bp |
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| Protein Length | 158 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640777263 |
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| Product | helix-turn-helix domain-containing protein |
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| Protein accession | YP_001314195 |
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| Protein GI | 150377600 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAACGGA AGAACGCGGT AAACAGGGAC ATTAAATTGC TTCGCCGCCT GCTGCGCGCA
AGAGACCCGA TTGACGCCGA ACCGCACCGA GGCTGGACGG TCACGCAACT TGCAAAGGTC
AGCGGCGTCT CTGAAGCTTA CTTCGCTCGA TCTTTCCGTG ACGCGTTCGG CGTTCCTCCG
CACTGCTCCT TGCTCTCCTG GCGGGTCGAA CGTGCCGCCG CCCTGCTGAG CGATACGGAG
CTGCCCATTA TCGACATTGC GATGCAGGTT GGGTGGGACA GTATAGGGAC CTCTGGTCTT
ACATTCAGGG ACATAATGGG AGAGAACCCC ACAGCCCTTC GCCGTCGGCT CAACATCGAT
AAAGATGTAC TTGAATGGGT GCCCCATTGC TTCCTAAGCG CTTCACAGCG CTCCCATCTC
AAGCTAACGA AAGGCGGTAG GCAGGGCAAC GACGACGCGG CGAAACCGAG ATCGTGA
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| Protein sequence | MERKNAVNRD IKLLRRLLRA RDPIDAEPHR GWTVTQLAKV SGVSEAYFAR SFRDAFGVPP
HCSLLSWRVE RAAALLSDTE LPIIDIAMQV GWDSIGTSGL TFRDIMGENP TALRRRLNID
KDVLEWVPHC FLSASQRSHL KLTKGGRQGN DDAAKPRS
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