| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5493 |
|---|
| Symbol | |
|---|
| ID | 5319795 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009621 |
|---|
| Strand | - |
|---|
| Start bp | 460347 |
|---|
| End bp | 461054 |
|---|
| Gene Length | 708 bp |
|---|
| Protein Length | 235 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640777248 |
|---|
| Product | cytoplasmic chaperone TorD family protein |
|---|
| Protein accession | YP_001314180 |
|---|
| Protein GI | 150377585 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3381] Uncharacterized component of anaerobic dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.506454 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGACC TATTCAGGCA GCACGGTCAA GGTATGATGA ACCACGACTT GCTTTCAGAT
CAGGCCCGGG AACAGCCAGA TGGAGCGGGT GCTCCAATCT TCGGTGCAGG AACAGCTGTT
CTCGATGATG TAGATCAGGC CCGGGCGGAC GAATACGCAC TCCTCGCCTC ATTATTGATC
ACCCCGCCGG ACAGCGGATC GCTCGCCAGG CTTTCATACT TGTCGGACAA CAGCGACACA
CCGCTCGGCC GTGCCCACAT CGCACTTGCT CAAGCGGCAG CGTCATATTC GCACGAGGCG
ATCCATCGCG AATATTCCGA GCTGTTCATT GGCGTGGGAC GCGGAGAACT CCTTCCCTAC
GCATCCTATT ATCTCACCGG CTTCCTCAAC GAACGCCCGC TTGCGCGCCT GCGGGCAGAC
ATGGCCCGTT TCGGTATCGA GCGCGCCGAG GGCCACCCCG AGCCCGAGGA TCATCTCGCC
AGCGTATGCG AAATGATGAG CGGCTTTGCC TGCAACCACT TTGCCGTCTC CCACGACGAG
GAGCAGGATT TCTTCAGACG CCACGTCGAG CCGTGGGCCG GGCGTTTCTT CAGCGATCTG
GAACACGCCA AGGGCGCCAA ATTCTACCGA TCGGTCGGCA CGGTAGGTCG GCTTTTCATC
GAGATCGAAA GCGAAGCCTT CGCCATGGAG GCGCGGCAAA ACGCATAG
|
|---|
| Protein sequence | MSDLFRQHGQ GMMNHDLLSD QAREQPDGAG APIFGAGTAV LDDVDQARAD EYALLASLLI
TPPDSGSLAR LSYLSDNSDT PLGRAHIALA QAAASYSHEA IHREYSELFI GVGRGELLPY
ASYYLTGFLN ERPLARLRAD MARFGIERAE GHPEPEDHLA SVCEMMSGFA CNHFAVSHDE
EQDFFRRHVE PWAGRFFSDL EHAKGAKFYR SVGTVGRLFI EIESEAFAME ARQNA
|
|---|
| |