Gene Smed_5490 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_5490 
Symbol 
ID5319792 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp456554 
End bp457150 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content60% 
IMG OID640777245 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_001314177 
Protein GI150377582 
COG category[C] Energy production and conversion 
COG ID[COG0437] Fe-S-cluster-containing hydrogenase components 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACGGA TGAAATTCCT TTGTGACGCC GAACGTTGTA TCGAGTGCAA TGCCTGCGTT 
ACCGCCTGCA AGAACGAGCA CGACGTACCG TGGGGTATCA ATCGGCGGCG CGTCGTCACC
ATCAATGACG GCAAGCCGGG CGAACGCTCC GTCTCGATGG CCTGCATGCA CTGTACGGAC
GCACCCTGCG CGGCAGTCTG TCCCGTTGAC TGTTTTTACA CCACTGCGGA TGCAGTGGTG
TTGCATTCCA AGGATCTGTG CATCGGCTGC GGCTACTGTT TCTACGCCTG TCCGTTCGGC
GCGCCGCAGT ATCCGCGCGT CGGCAATTTC GGCTCACGCG GCAAGATGGA CAAATGCACT
TTTTGTGCGG CAGGACCGGA GGGCGACTCG ACGGAGGTCG AGTATGCGAA ATATGGAGCC
AACCGGCTGG CGGAAGGCAA GCTGCCACTC TGTGCGGAGA TGTGCTCGAC GAAATCGCTG
CTCGCTGGCG ACGGAGTGAT CATTGCCGCG ATCTACAAGG AGCGTGTGAC TCAGCGAGGC
TATGGCTCGG GCGCATGGGG CTGGCAGACC GCCTATCGTG AGACAGTGGA CGTCTAG
 
Protein sequence
MARMKFLCDA ERCIECNACV TACKNEHDVP WGINRRRVVT INDGKPGERS VSMACMHCTD 
APCAAVCPVD CFYTTADAVV LHSKDLCIGC GYCFYACPFG APQYPRVGNF GSRGKMDKCT
FCAAGPEGDS TEVEYAKYGA NRLAEGKLPL CAEMCSTKSL LAGDGVIIAA IYKERVTQRG
YGSGAWGWQT AYRETVDV