Gene Smed_5487 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_5487 
Symbol 
ID5319789 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp452638 
End bp453921 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content65% 
IMG OID640777242 
Productmolybdopterin biosynthesis protein MoeA 
Protein accessionYP_001314174 
Protein GI150377579 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0303] Molybdopterin biosynthesis enzyme 
TIGRFAM ID[TIGR00177] molybdenum cofactor synthesis domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.273435 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGTGA CGCCTCCTCC GCTTACGCCG CCACGCTTGA AGAACGATTG TTTCGCCCTG 
CCACCGGGCG TTGATTGGAC TCCCGTGGAT ACTGCGCTCG ACCTGCTACG GGCAAACCTC
TCTCCTGTCG TGGATATCAA GGAACTGGAT GTTTCTGATG CGCTCGGCCA CGTCCTGGCG
CACCCTGCAG TTGCACGTCG CTCCAATCCG CCCGCCGCCA ACTCGGCCGT CGATGGATAC
GGTTTTGCTC ATGCGGCTAC CGGCGAGGGC CTCCAGACGC TGCCGCTGAT CGAAGGCCGT
GCGGCGGCGG GTGTGCCATT TTCAGGACGC GTGCCGGAGG GAATGGCGAT CCGCATCCTG
ACCGGGGCGA TTCTGCCCGC AGGAGTCGAC ACAGTGGTGC TGGAGGAGGA TACCGCCGGC
GATGGCCACC GCATAGCCTT CCACGGTCCG ATCAAGATGC GATCGAATAC CCGTAAGGCC
GGCGAGGACG TGATCGCCGG TGATGTCGCA TTGCCGGCCG GGCATCGCCT GCGCGCGCCA
GATCTGGCGC TGTTGTCTGC TGTTGGGACG ACAAGGGTCT CGGTTTTCCG TCCCCTGCGC
TTGGGTGTGC TGTCCACCGG TGACGAGATC GTCGCCGATT CTGGCGGAGC CCTTCTGGAA
GTCGGCCGCA TCTATGACGC CAATCGGCCG ATGCTTCTGG CAATGGCGCG GCGCTGGAAC
CATGTGCCTG TGGACCTCGG TCATGTCGGC GACGACCGAG CAGCACTGGC AGACCGGCTT
GACAGAGGGG CAAGCGAGGC AGATGTAATC TTCACCTCCG GCGGGGCCTC GGCGGGAGAT
GAGGATCATG TCTCGGCGCT GTTACAGGAG GCCGGAGTGA TGCAAAGCTG GCGTATCGCC
GTCAAGCCGG GCCGGCCATT GGCGCTTGGT TTGTGGAAGG GTGTTCCGGT GTTCGGCCTG
CCGGGAAATC CGGTCGCGGC CTTCGTCTGC ACTCTTATAT TCGGCCGCCC GGCCCTCTCC
CTGTTGGCCG GTGAGGGATG GGAGGAGCCA GTGGGTTTCA CGGTTCCGGC GGCCTTCGAA
AAGAACAAGC GCGCAGGCCG GCGCGAGTAT TTGCGGGCGC GGTTGACGCC GCAAGGCCAC
GCCGAGGTTT TCCGGTCGGA AGGTTCGGGC CGGATCAGCG GGCTTTCCTG GGCCACCGGA
CTGGTCGAAC TCGGCGATGG CGCCCGCCGG ATCGCACCGG GCGATCCGGT TCGTTTCCTC
CCCTACGGCT CCTTTGAATT GTAG
 
Protein sequence
MSVTPPPLTP PRLKNDCFAL PPGVDWTPVD TALDLLRANL SPVVDIKELD VSDALGHVLA 
HPAVARRSNP PAANSAVDGY GFAHAATGEG LQTLPLIEGR AAAGVPFSGR VPEGMAIRIL
TGAILPAGVD TVVLEEDTAG DGHRIAFHGP IKMRSNTRKA GEDVIAGDVA LPAGHRLRAP
DLALLSAVGT TRVSVFRPLR LGVLSTGDEI VADSGGALLE VGRIYDANRP MLLAMARRWN
HVPVDLGHVG DDRAALADRL DRGASEADVI FTSGGASAGD EDHVSALLQE AGVMQSWRIA
VKPGRPLALG LWKGVPVFGL PGNPVAAFVC TLIFGRPALS LLAGEGWEEP VGFTVPAAFE
KNKRAGRREY LRARLTPQGH AEVFRSEGSG RISGLSWATG LVELGDGARR IAPGDPVRFL
PYGSFEL