Gene Smed_5480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_5480 
Symbol 
ID5319782 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp448583 
End bp448858 
Gene Length276 bp 
Protein Length91 aa 
Translation table11 
GC content52% 
IMG OID640777239 
Productplasmid maintenance system killer 
Protein accessionYP_001314171 
Protein GI150377576 
COG category[R] General function prediction only 
COG ID[COG3549] Plasmid maintenance system killer protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCAGGT CATTTAAGGA CGCCGAAGCC GTTGCGCGCT GCAAGGCACC AAAAGGCTTT 
CCTTCAGATA TCGTGAGGTC GGCCGTTCGT AAATTGACGA TCCTGAACAG TGCTGCCGCT
CTCGACGACT TGCGTTCCCC TCCGGGAAAT CGACTTGAAG CGCTGAAGGG CGATAGAGAA
GGCCAACACT CAAACCGGAT CAATGATCAA TGGCGCATAT GCTTCGTATG GACAGACGCC
GGTATCGAAG ACGTCGAAAT AGTTGACTAC CATTAA
 
Protein sequence
MIRSFKDAEA VARCKAPKGF PSDIVRSAVR KLTILNSAAA LDDLRSPPGN RLEALKGDRE 
GQHSNRINDQ WRICFVWTDA GIEDVEIVDY H