Gene Smed_5476 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_5476 
Symbol 
ID5319778 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp445160 
End bp445834 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content58% 
IMG OID640777237 
Producthistidinol-phosphate phosphatase, putative 
Protein accessionYP_001314169 
Protein GI150377574 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0483] Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family 
TIGRFAM ID[TIGR02067] histidinol-phosphate phosphatase HisN, inositol monophosphatase family 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAAAT CGGACGCCAG TCCGGTGACC GAAACTGATC GGCTTGTCGA GCAATGCCTG 
CGTGAGCGCA TTGCCGATCG TTTTCCCGAC CATGGGGTGC TTGGTGAGGA ATTCGGAGCC
GAAGGGTTGG ACAAGGAGTT CGTCTGGGTT ATCGATCCAA TCGACGGCAC CAAAGCCTTC
ATAGGCGGTC TCCCAGTGTA CGGCACATTG ATTTCGTTAA CGAGAGGGGG TACGCCGGTT
CTTGGGTTGG TCGACAATCC AACGACGGGC GACCGCTGGC TCGGCGTGTC GGGTCGGACA
ACTACCCTCA ACGGCACACC AATCAGAACG GCAGCGACCA CTGTTCTCGC AACAGCCTTT
ATGGCGAATG GTAATCCGGA CGCATTCAGC CACCCTGACA GAGGCAGGTT TGAATCTCTC
CGAACGTCCA CGCGCTGGTG TGTCTACGGC GGAAGCTGCA TAGCGTACGG CCGTGTAGCG
GACGGCAGCG TAGACATCAG CATAGATGGA GGCTTAGACC CCTACGACTA TTGCGCGCTC
GTTCCCGTGA TTACGGGCGC CGGCGGCCGC ATTTCGGACT GGGAAGGACA GCCGCTGACT
CTCAGCTCTG GAAACCTTTG CGTAGCCACC GCGAATGAAG CTTTGCATCG ACAAGTTCTC
GAGAGACTGG CGTAA
 
Protein sequence
MAKSDASPVT ETDRLVEQCL RERIADRFPD HGVLGEEFGA EGLDKEFVWV IDPIDGTKAF 
IGGLPVYGTL ISLTRGGTPV LGLVDNPTTG DRWLGVSGRT TTLNGTPIRT AATTVLATAF
MANGNPDAFS HPDRGRFESL RTSTRWCVYG GSCIAYGRVA DGSVDISIDG GLDPYDYCAL
VPVITGAGGR ISDWEGQPLT LSSGNLCVAT ANEALHRQVL ERLA