| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5470 |
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| Symbol | |
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| ID | 5319772 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | + |
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| Start bp | 438231 |
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| End bp | 439325 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640777231 |
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| Product | spermidine/putrescine ABC transporter ATPase subunit |
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| Protein accession | YP_001314163 |
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| Protein GI | 150377568 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.867721 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGTCAT CCAGCCTGAC CGTCCAAAAA CTCGCCAAGC GTTATGGTGA CTTTATTGCA
CTCGCCGAAA CGGATCTTAC GGTTACGGAG GGCGAATTCC TGACCCTTCT CGGTCCATCC
GGTTCCGGCA AGACAACCTT GCTCAGCCTC ATTGCCGGTC TCTCGCGCCC GGACCACGGC
GCGGTGATGA TTGGCAAAAC CGATGTCACC TACAGCGCCC CTCACTCGCG TGACATTGGC
GTCGTCTTCC AGAATTATGC TCTTTTCCCG CACATGACCA TTCTCGAAAA CATCGCCTTC
CCATTGAAAA TGCGCAAGGT CGGTGCCGAG GAGGCTCGCA AGCGCGCACA GGAAGCACTG
GAGATGATCC GTCTTCCGCA CATTGCGCAG CGCTATCCGA GGGAGCTTTC CGGGGGACAG
CAGCAGCGTG TGGCACTCGC CCGCTGCATG GTCTATCGCC CGTCGATCAT CCTCATGGAC
GAACCGCTTG GAGCGCTCGA CAAGAAGCTG CGTGAACACA TGCAGCTGGA GATCAAACGT
ATCCACCGAG AGCTCGGCGC AACGATCATT TACGTGACCC ACGATCAGGA AGAGGCGATG
ACCATGTCGG ATCGCATCTG CCTGATGAAT TCCGGAAAGA TCGAACAGTT GGGAACGCCG
GCCGATCTCT ACTTCCGCCC GAAGACGCTC TTCGTTGCCG ATTTTCTGGG CGAATCCAAT
CTTCTTCCGG CCACCGCCGG ACGCTCCCAA GGCGAGCTGA TGAACGTTGA AATCGGCCCT
CAGCGCGTGG CAGCACAGGC TCTGGCAAAC AACGAGGTGT CGGTGGGAGA TGCAATCCAT
ATCATGATCC GCCCCCAGAA CCTCACGATC GAGAAAGCCG AGGCCAAGGA CCGCATCAGC
GCCATCGTGA GCGACGTCAT GGTGACCGGC AGCCTGACGA AGATCTATAT GAACGCGGTC
GATGCCAGCT TGCCTGCGCT GGTGGCTGCG TTTCCGACCC GCCTCAACGG TGATCAGTAC
CGGATGGGTG ACAAGGTTGC GCTTCTCTGG CAGGGAGCGG ACGCCATCGC GATCAGCGAG
AAGACGAGGA GCTAA
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| Protein sequence | MSSSSLTVQK LAKRYGDFIA LAETDLTVTE GEFLTLLGPS GSGKTTLLSL IAGLSRPDHG
AVMIGKTDVT YSAPHSRDIG VVFQNYALFP HMTILENIAF PLKMRKVGAE EARKRAQEAL
EMIRLPHIAQ RYPRELSGGQ QQRVALARCM VYRPSIILMD EPLGALDKKL REHMQLEIKR
IHRELGATII YVTHDQEEAM TMSDRICLMN SGKIEQLGTP ADLYFRPKTL FVADFLGESN
LLPATAGRSQ GELMNVEIGP QRVAAQALAN NEVSVGDAIH IMIRPQNLTI EKAEAKDRIS
AIVSDVMVTG SLTKIYMNAV DASLPALVAA FPTRLNGDQY RMGDKVALLW QGADAIAISE
KTRS
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