Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_5465 |
Symbol | |
ID | 5319767 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009621 |
Strand | + |
Start bp | 431997 |
End bp | 434069 |
Gene Length | 2073 bp |
Protein Length | 690 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640777227 |
Product | NADH:flavin oxidoreductase/NADH oxidase |
Protein accession | YP_001314159 |
Protein GI | 150377564 |
COG category | [C] Energy production and conversion |
COG ID | [COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.663425 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.914634 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGGAAC GAACGTCACC CGCTGCTCCT ACGGACATGC CGCCCACTTC GGCGGGCAAG CCTGATCCGT TGCTGCGGCC GTTACAGCTT GGCCAACTCA CCCTGCGTAA CCGGATCATG AGCACCAGCC ATGAGACCGC GCTTGACGAG GGCGGTCATC CGTTGGAAGC CTATCAGCGT TATCATGAGG AAAAGGCCAA GGGCGGGCTT GCGCTGACGA TGTTCGGCGG CTCGGCGCGC ATCTCCGCCG ATACGAGCTG GGGCGGCACG CAGCTTGACG TGTCGAGCGA TGCGATCATT CCGGTGTTCC GCGCCTTCTC CGACCGCATC CACCGTCATG GTGCGGCGCT CATGTGCCAG ATTTCCCATG TCGGCCGGCG GGCGAATGCC ACGGCCGGCG CCTGGCTTCC CGCGCTCGGA CCCTCCCATT CCCGCGAGGA TTATAACCGC AGCTTCGCCC ATGAGATGGA CAGCCACGAT ATCGCGCGCA TTGTGCGAGA CTTTGGCCAT GCGGCGCGAC GGGCGCGCGA GGGCGGTCTC GACGGCATCG AGACGATGAC CGGAGGCCAC CTGATTGGGC AGTTCCTGTC GCCGATGGTC AATCGCCGCA CCGATGAATT CGGCGGCTCG CTTGAAAACC GGATGCGCTT CCTGCGCATG GTCTACGAGG AGATCCGCCG AGAAGTCGGC AGCGATTATC CGGTCGGCAT CCGCTACACG ATCGATGAGG ATCACAAGGA CGGCCTGAGC TTTGCCGAGG CAGTCACCGT TGCCAACAGG CTGGAGCGGG AAGGGCTGGT CGATTTCTTC AACTGCATCT TCGGCCGGTT CGACACCCGC CTCAACCTGC TGGTCTATAA CATTCCCGAC ATGACGGCGG CATCCGCGCC ATGGCTGCGC CAAGTCGGGA CGTTCAAGGC GGAAACGAGC CTGCCGGTCT TCCACGCTGC CAAGATCGCG GATGTCGCGA CCGCGCGCTA CGCGATCGAT GCGGGGCTGG TCGACATGGT CGGCATGACG CGTGCGCATA TGGCAGATCC GCAGATCGTC AACAAACTGC GCTCGGGCAG GCAGGACCAG ATCCGGCCGT GCGTCGGCGC ATCGCATTGT CTCTATCGTC CGGTGCATTG CATCCACAAT CCGGCAACGG GCCGCGAGAC CTGGTTGCCG CAGGTGATGG GGCGCTCGGC GGATGCCGGG CGCAAGGCAG TCGTCGTGGG CGGCGGGCCA GCAGGGGTGG AGGCTGCGCG GGTGCTCGCC GAGCGGGGCC ACTACGTCGT GCTCCTGGAA GCGGCGGACC GGCTTGGCGG GCAGCTCGTG CTGGCTGCAA AGGCCCGTCT CCGCCGCGAC CTGATCGGCA TCGTCGACTG GCGCGTTGCC GAGCTGGAGC GCCTCGGGGT GGATGTCCGG CTCAATGTCT ATGCGGAGGC GCTGGACGTT CTTGCCGACG CGCCAGATCT CGTTCTCGTC GCCACCGGCG GCATTCCGGA TTTCGGGTCC GTCGGGGGAA GCGAGCTGTG CCTCAGTGTC TTCGACGCTC TTGGCAATCC CGCGCAGGTC GCGGATGACG TGCTGATCTA TGACGCGACC GGGCGCCATC CCGCGCCCTC GGCCGCCGCC GAGATCGCAG CAACCGGTAG AACGGTGACT TTCGTTGCCC GCGACACTTC CATCGCGCCG GAGATGGAGC ATCACTCGAG CATCACCTAC CGCAAGGCGC TCGCCGGGCA TGACGTGCGG GTTCTGCTGG AACACGAACT GGTGTCGGTG AGCGCGCGGG ATGGACGGCG GGAGGTGGTG TTGCGGCACC TGCTCACGGG CCGGGAACGG CGCGAGACCT TTGCGCAGGT CATCGTCGAG CATGGGACGA TCCCGGTGAG CGATCTCTTC GACGAGCTGC GGGCCTTCTC GGCAAACGAT GGCGTCACGG AGATCGAAAG CTTGATCGGT CCTGCACCAC TACGCGGCCG GCGAATCTCT GGTTTCGAGC TGCACAGGAT CGGGGATGCT GTCAGCAGCC GGTCGGTTCA TGCTGCGATG CTGGATGCCC TAAGGCTCGC GGTGCAATTC TGA
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Protein sequence | MEERTSPAAP TDMPPTSAGK PDPLLRPLQL GQLTLRNRIM STSHETALDE GGHPLEAYQR YHEEKAKGGL ALTMFGGSAR ISADTSWGGT QLDVSSDAII PVFRAFSDRI HRHGAALMCQ ISHVGRRANA TAGAWLPALG PSHSREDYNR SFAHEMDSHD IARIVRDFGH AARRAREGGL DGIETMTGGH LIGQFLSPMV NRRTDEFGGS LENRMRFLRM VYEEIRREVG SDYPVGIRYT IDEDHKDGLS FAEAVTVANR LEREGLVDFF NCIFGRFDTR LNLLVYNIPD MTAASAPWLR QVGTFKAETS LPVFHAAKIA DVATARYAID AGLVDMVGMT RAHMADPQIV NKLRSGRQDQ IRPCVGASHC LYRPVHCIHN PATGRETWLP QVMGRSADAG RKAVVVGGGP AGVEAARVLA ERGHYVVLLE AADRLGGQLV LAAKARLRRD LIGIVDWRVA ELERLGVDVR LNVYAEALDV LADAPDLVLV ATGGIPDFGS VGGSELCLSV FDALGNPAQV ADDVLIYDAT GRHPAPSAAA EIAATGRTVT FVARDTSIAP EMEHHSSITY RKALAGHDVR VLLEHELVSV SARDGRREVV LRHLLTGRER RETFAQVIVE HGTIPVSDLF DELRAFSAND GVTEIESLIG PAPLRGRRIS GFELHRIGDA VSSRSVHAAM LDALRLAVQF
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