| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5451 |
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| Symbol | |
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| ID | 5319753 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 416697 |
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| End bp | 418307 |
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| Gene Length | 1611 bp |
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| Protein Length | 536 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640777213 |
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| Product | transposase IS204/IS1001/IS1096/IS1165 family protein |
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| Protein accession | YP_001314145 |
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| Protein GI | 150377550 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3464] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.268297 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAACGA AAACGAAATG GTCGCCCGGC CCGGGGGCAA AAGTTCTGGG TATCTCGCTC
GATGATGATG ACGGTTGGGT TGTTTCCGCC GCCGGACCAG TTTTCGGCAT TTGCCCTGAC
TGCGGACGGC GGACCCGACA TCGGCATGGC TGGTCCAACC GTAGCCTCCA AGATCTGCCG
GTCCAGGGCA AAACCGTAAC GGTGAAGCTT CGGTTGAGCC GCTGGCGGTG CGCGCATCAG
AAATGTGAAC GACAAACGTT CACCGACCGA CTGCCGACGA TTGCTTCCCC TTATGCGCGC
CGGACAAGGA GGGTCTCCGA GATTGTCGGT CTGCTCGGCC ATAGCGCAGG CGGCCGGCCC
GGCGAGCGCT TGATCCGACG GCTCGGCATG CCGGTCAGCG ACGACACGAT CCTGCGGCAG
CTGAAGCGGG ATGCCGCGCT CGTTTCCTGC GATGCCACGA TCCGGGTCGT CGGCATAGAT
GATTGGAGCT GGCGGCGATC GTGGCGCTAC GGCACGATGA TCGTCGACCT GGAGCGCCGT
TCGGTTGTCG ATATTCTTGA GGACCGGAGC GTAGCGAGTG TCGCGCGATG GCTGGAGCAG
CATCCTTCTG TCGAGATCGT GAGCCGAGAC CGAGGCGGGC TGTACGCACA AGCTGCTCGC
GAGGGTGCGC CGCAAGCTCG TCAAGTCGCT GATCGGTTCC ATCTCATGCA GAATCTGCGA
GTCGCAATCG AGGAGCAGAT GAGCCTTGGC GGCCGCGCCA CCGGACGAGC ATTGCTGCCG
GATAAATGGA TCGGGAGCGC GCAAATCGAT CTGCTTCAGG ATGATCCGCA CGTTGACGCA
AGGCACCGGC GCCGGGGGCG TCACGCTCAT CGAGAATCAC GGCAGGCGGT GTTCGATACA
GTGCACGCTT TGAATGAGGA AGGTTTGTCC TGTTCGGAGA TCGCACGTCG CACCGGCTAC
GGGCGGCGCA GCATCGCGAA ATGGCTGACT TTCGAAACGC CACCCGACCG ACAGAAGGCG
GCGTTGAAGC CGACATCGCC CCTGTACTTT GAGGCGTTTC TCGCCGTGTG CTGGAAAGAT
GGCAATCGCT GCGGACGGCA TCTGTTCTAC GATATCAAAC AGCGCGGCTA CACGGGCAGT
TTCTCGAATC TCGAGCGGCT TCTCGCAAGC TGGCGCCGCT CGGAGAGATC GGTCGAGGGC
AGCGCGTCGT CGGCTCCGAT CATCTCGCAT CAACGGGGCC GCGGTGTTGT CCCCATACGC
GATCCGGAGA CCGGCCATGT GATCTCACCG GTGGTCGCAG CTGCCCTCTG CATCAAGCCG
CGAAGCATGC TGACGATCAC TCAGGCGAGA AAGGTCGATG CCTTGAAACA GGGCGCGCCT
GAGTTCGCTT TGATGCGCAG CCTTGGCATG CGCTTTCGCG GAATCTTTCG CAGCGGCGAT
CCGGGCAAGC TTAACAGCTG GATTGACGAT GCCGTTAATT CCGGTTTGGT CGCAATTGAG
CGGTTCGCAC GCGTCCTGCA CCGTGACATC GGCGCCGTCC GCAACGCCGT GGAACTCCCC
TGGAGCAACG GCCAGGCGGA AGGCCAGATC AACCGTCTGA AGACAATTTA G
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| Protein sequence | MQTKTKWSPG PGAKVLGISL DDDDGWVVSA AGPVFGICPD CGRRTRHRHG WSNRSLQDLP
VQGKTVTVKL RLSRWRCAHQ KCERQTFTDR LPTIASPYAR RTRRVSEIVG LLGHSAGGRP
GERLIRRLGM PVSDDTILRQ LKRDAALVSC DATIRVVGID DWSWRRSWRY GTMIVDLERR
SVVDILEDRS VASVARWLEQ HPSVEIVSRD RGGLYAQAAR EGAPQARQVA DRFHLMQNLR
VAIEEQMSLG GRATGRALLP DKWIGSAQID LLQDDPHVDA RHRRRGRHAH RESRQAVFDT
VHALNEEGLS CSEIARRTGY GRRSIAKWLT FETPPDRQKA ALKPTSPLYF EAFLAVCWKD
GNRCGRHLFY DIKQRGYTGS FSNLERLLAS WRRSERSVEG SASSAPIISH QRGRGVVPIR
DPETGHVISP VVAAALCIKP RSMLTITQAR KVDALKQGAP EFALMRSLGM RFRGIFRSGD
PGKLNSWIDD AVNSGLVAIE RFARVLHRDI GAVRNAVELP WSNGQAEGQI NRLKTI
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